Gene
RNA
| Item | Value |
|---|---|
| gene id | G956856 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 23859269 ~ 23859787 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1090945 | True | 297 | lncRNA | 0.42 | 3 | 23859269 | 23859787 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ppp1r17 | ppp1r17 | coding | upstream | 93356 | 23763028 ~ 23765913 (+) |
| itprid1 | LOC106578515 | coding | upstream | 111346 | 23723213 ~ 23747923 (+) |
| eif1b | LOC106578512 | coding | upstream | 180975 | 23675584 ~ 23678294 (+) |
| LOC110535505 | LOC106578511 | coding | upstream | 183786 | 23666722 ~ 23675483 (+) |
| LOC110535501 | LOC106578509 | coding | upstream | 197744 | 23635899 ~ 23661525 (+) |
| trdmt1 | trdmt1 | coding | downstream | 117561 | 23977348 ~ 23996262 (+) |
| cubn | cubn | coding | downstream | 136801 | 23996588 ~ 24049588 (+) |
| rsu1 | rsu1 | coding | downstream | 198937 | 24058724 ~ 24094985 (+) |
| c1ql3a | c1ql3 | coding | downstream | 237303 | 24097090 ~ 24103710 (+) |
| dtx3l1 | LOC106578522 | coding | downstream | 286689 | 24146476 ~ 24149671 (+) |
| G956839 | NA | non-coding | upstream | 31539 | 23827231 ~ 23827730 (+) |
| G956824 | LOC108280739 | non-coding | upstream | 47172 | 23811621 ~ 23812097 (+) |
| G956822 | NA | non-coding | upstream | 51316 | 23807727 ~ 23807953 (+) |
| G956820 | NA | non-coding | upstream | 56000 | 23803053 ~ 23803269 (+) |
| G956819 | NA | non-coding | upstream | 56810 | 23802201 ~ 23802459 (+) |
| G956862 | NA | non-coding | downstream | 7866 | 23867653 ~ 23867897 (+) |
| G956863 | NA | non-coding | downstream | 10399 | 23870186 ~ 23870407 (+) |
| G956868 | NA | non-coding | downstream | 16800 | 23876587 ~ 23876813 (+) |
| G957279 | NA | non-coding | downstream | 22774 | 23882561 ~ 23882849 (+) |
| G957283 | NA | non-coding | downstream | 30242 | 23890029 ~ 23890149 (+) |
| G956797 | NA | other | upstream | 82424 | 23775772 ~ 23776845 (+) |
| G956728 | LOC106613263 | other | upstream | 193339 | 23665288 ~ 23665930 (+) |
| tlcd4a | LOC106570700 | other | upstream | 1118022 | 22712577 ~ 22741263 (+) |
| phldb2b | tcpe | other | upstream | 4089916 | 19740565 ~ 19799150 (+) |
| G951511 | NA | other | upstream | 4732184 | 19126665 ~ 19127085 (+) |
| G957942 | NA | other | downstream | 740684 | 24600471 ~ 24601653 (+) |
| G958300 | idi1 | other | downstream | 934813 | 24794600 ~ 24795736 (+) |
| G960696 | LOC106583976 | other | downstream | 2853838 | 26713625 ~ 26797294 (+) |
| G960816 | armc4 | other | downstream | 3068889 | 26928676 ~ 26929027 (+) |
| bambia | LOC106578551 | other | downstream | 3549215 | 27409002 ~ 27412913 (+) |
