Gene
RNA
| Item | Value |
|---|---|
| gene id | G957307 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 23919699 ~ 23919959 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1091440 | True | 261 | lncRNA | 0.59 | 1 | 23919699 | 23919959 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ppp1r17 | ppp1r17 | coding | upstream | 153786 | 23763028 ~ 23765913 (+) |
| itprid1 | LOC106578515 | coding | upstream | 171776 | 23723213 ~ 23747923 (+) |
| eif1b | LOC106578512 | coding | upstream | 241405 | 23675584 ~ 23678294 (+) |
| LOC110535505 | LOC106578511 | coding | upstream | 244216 | 23666722 ~ 23675483 (+) |
| LOC110535501 | LOC106578509 | coding | upstream | 258174 | 23635899 ~ 23661525 (+) |
| trdmt1 | trdmt1 | coding | downstream | 57389 | 23977348 ~ 23996262 (+) |
| cubn | cubn | coding | downstream | 76629 | 23996588 ~ 24049588 (+) |
| rsu1 | rsu1 | coding | downstream | 138765 | 24058724 ~ 24094985 (+) |
| c1ql3a | c1ql3 | coding | downstream | 177131 | 24097090 ~ 24103710 (+) |
| dtx3l1 | LOC106578522 | coding | downstream | 226517 | 24146476 ~ 24149671 (+) |
| G957301 | NA | non-coding | upstream | 16867 | 23902619 ~ 23902832 (+) |
| G957299 | NA | non-coding | upstream | 18377 | 23900958 ~ 23901322 (+) |
| G957285 | NA | non-coding | upstream | 27438 | 23892037 ~ 23892261 (+) |
| G957283 | NA | non-coding | upstream | 29550 | 23890029 ~ 23890149 (+) |
| G957279 | NA | non-coding | upstream | 36850 | 23882561 ~ 23882849 (+) |
| G957316 | LOC106583515 | non-coding | downstream | 13054 | 23933013 ~ 23933469 (+) |
| G957344 | NA | non-coding | downstream | 70596 | 23990555 ~ 23991124 (+) |
| G957406 | NA | non-coding | downstream | 220864 | 24140823 ~ 24141306 (+) |
| G957407 | NA | non-coding | downstream | 221486 | 24141445 ~ 24141684 (+) |
| G956797 | NA | other | upstream | 142854 | 23775772 ~ 23776845 (+) |
| G956728 | LOC106613263 | other | upstream | 253769 | 23665288 ~ 23665930 (+) |
| tlcd4a | LOC106570700 | other | upstream | 1178452 | 22712577 ~ 22741263 (+) |
| phldb2b | tcpe | other | upstream | 4150346 | 19740565 ~ 19799150 (+) |
| G951511 | NA | other | upstream | 4792614 | 19126665 ~ 19127085 (+) |
| G957942 | NA | other | downstream | 680512 | 24600471 ~ 24601653 (+) |
| G958300 | idi1 | other | downstream | 874641 | 24794600 ~ 24795736 (+) |
| G960696 | LOC106583976 | other | downstream | 2793666 | 26713625 ~ 26797294 (+) |
| G960816 | armc4 | other | downstream | 3008717 | 26928676 ~ 26929027 (+) |
| bambia | LOC106578551 | other | downstream | 3489043 | 27409002 ~ 27412913 (+) |
