Gene
RNA
| Item | Value |
|---|---|
| gene id | G957316 |
| gene name | LOC106583515 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 23933013 ~ 23933469 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb1 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1091449 | True | 457 | lncRNA | 0.46 | 1 | 23933013 | 23933469 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ppp1r17 | ppp1r17 | coding | upstream | 167100 | 23763028 ~ 23765913 (+) |
| itprid1 | LOC106578515 | coding | upstream | 185090 | 23723213 ~ 23747923 (+) |
| eif1b | LOC106578512 | coding | upstream | 254719 | 23675584 ~ 23678294 (+) |
| LOC110535505 | LOC106578511 | coding | upstream | 257530 | 23666722 ~ 23675483 (+) |
| LOC110535501 | LOC106578509 | coding | upstream | 271488 | 23635899 ~ 23661525 (+) |
| trdmt1 | trdmt1 | coding | downstream | 43879 | 23977348 ~ 23996262 (+) |
| cubn | cubn | coding | downstream | 63119 | 23996588 ~ 24049588 (+) |
| rsu1 | rsu1 | coding | downstream | 125255 | 24058724 ~ 24094985 (+) |
| c1ql3a | c1ql3 | coding | downstream | 163621 | 24097090 ~ 24103710 (+) |
| dtx3l1 | LOC106578522 | coding | downstream | 213007 | 24146476 ~ 24149671 (+) |
| G957307 | NA | non-coding | upstream | 13054 | 23919699 ~ 23919959 (+) |
| G957301 | NA | non-coding | upstream | 30181 | 23902619 ~ 23902832 (+) |
| G957299 | NA | non-coding | upstream | 31691 | 23900958 ~ 23901322 (+) |
| G957285 | NA | non-coding | upstream | 40752 | 23892037 ~ 23892261 (+) |
| G957283 | NA | non-coding | upstream | 42864 | 23890029 ~ 23890149 (+) |
| G957344 | NA | non-coding | downstream | 57086 | 23990555 ~ 23991124 (+) |
| G957406 | NA | non-coding | downstream | 207354 | 24140823 ~ 24141306 (+) |
| G957407 | NA | non-coding | downstream | 207976 | 24141445 ~ 24141684 (+) |
| G957414 | NA | non-coding | downstream | 218505 | 24151974 ~ 24152283 (+) |
| G956797 | NA | other | upstream | 156168 | 23775772 ~ 23776845 (+) |
| G956728 | LOC106613263 | other | upstream | 267083 | 23665288 ~ 23665930 (+) |
| tlcd4a | LOC106570700 | other | upstream | 1191766 | 22712577 ~ 22741263 (+) |
| phldb2b | tcpe | other | upstream | 4163660 | 19740565 ~ 19799150 (+) |
| G951511 | NA | other | upstream | 4805928 | 19126665 ~ 19127085 (+) |
| G957942 | NA | other | downstream | 667002 | 24600471 ~ 24601653 (+) |
| G958300 | idi1 | other | downstream | 861131 | 24794600 ~ 24795736 (+) |
| G960696 | LOC106583976 | other | downstream | 2780156 | 26713625 ~ 26797294 (+) |
| G960816 | armc4 | other | downstream | 2995207 | 26928676 ~ 26929027 (+) |
| bambia | LOC106578551 | other | downstream | 3475533 | 27409002 ~ 27412913 (+) |
