G957344


Basic Information

Item Value
gene id G957344
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 23990555 ~ 23991124 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1091477
GCGAACCCGTACACATAAAtctcgctcatctcaatatctgcagTGCTGCTTGTGGCAATGTCATTTCGCTGAGTCTACcgttaaagctaatttcctgcagttctatgcattttgccatggctaatgctgtgtACATTTGCTCAAACATAACAAAATCTATACTGCTAAATTCATTGTTCTGGGAATTTtcaattctccctgATTGTTCGTTTTCAAAGAATATATTATATAAAATATTCAGGTTCATTATCTTCTACATACATCAaatctggttttagtcattttaaatttACACTGAAAGCGTTTATCCATCCCCATTATTCTAATAACATTTAattaaaaaagtatatatatacagtgccttcggaaagtattcagaccctttgcgtttttccacattttattacgttacagccttattgtaaaatggattaaataaatacatatcctcagcaatctacacacaataccacataatgacaaagcaaaaaagttTTTTGTAAAccggtcgaacatctctggagagacctgaaaatagctgtgcagc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1091477 True 547 lncRNA 0.34 2 23990555 23991124

Neighbor

gene id symbol gene type direction distance location
ppp1r17 ppp1r17 coding upstream 224642 23763028 ~ 23765913 (+)
itprid1 LOC106578515 coding upstream 242632 23723213 ~ 23747923 (+)
eif1b LOC106578512 coding upstream 312261 23675584 ~ 23678294 (+)
LOC110535505 LOC106578511 coding upstream 315072 23666722 ~ 23675483 (+)
LOC110535501 LOC106578509 coding upstream 329030 23635899 ~ 23661525 (+)
cubn cubn coding downstream 5464 23996588 ~ 24049588 (+)
rsu1 rsu1 coding downstream 67600 24058724 ~ 24094985 (+)
c1ql3a c1ql3 coding downstream 105966 24097090 ~ 24103710 (+)
dtx3l1 LOC106578522 coding downstream 155352 24146476 ~ 24149671 (+)
LOC110535520 LOC106578523 coding downstream 181972 24173096 ~ 24188768 (+)
G957316 LOC106583515 non-coding upstream 57086 23933013 ~ 23933469 (+)
G957307 NA non-coding upstream 70596 23919699 ~ 23919959 (+)
G957301 NA non-coding upstream 87723 23902619 ~ 23902832 (+)
G957299 NA non-coding upstream 89233 23900958 ~ 23901322 (+)
G957285 NA non-coding upstream 98294 23892037 ~ 23892261 (+)
G957406 NA non-coding downstream 149699 24140823 ~ 24141306 (+)
G957407 NA non-coding downstream 150321 24141445 ~ 24141684 (+)
G957414 NA non-coding downstream 160850 24151974 ~ 24152283 (+)
G957415 NA non-coding downstream 161947 24153071 ~ 24153331 (+)
G956797 NA other upstream 213710 23775772 ~ 23776845 (+)
G956728 LOC106613263 other upstream 324625 23665288 ~ 23665930 (+)
tlcd4a LOC106570700 other upstream 1249308 22712577 ~ 22741263 (+)
phldb2b tcpe other upstream 4221202 19740565 ~ 19799150 (+)
G951511 NA other upstream 4863470 19126665 ~ 19127085 (+)
G957942 NA other downstream 609347 24600471 ~ 24601653 (+)
G958300 idi1 other downstream 803476 24794600 ~ 24795736 (+)
G960696 LOC106583976 other downstream 2722501 26713625 ~ 26797294 (+)
G960816 armc4 other downstream 2937552 26928676 ~ 26929027 (+)
bambia LOC106578551 other downstream 3417878 27409002 ~ 27412913 (+)

Expression


Co-expression Network