G957414


Basic Information

Item Value
gene id G957414
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 24151974 ~ 24152283 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1091552
ttttatgattcataagtACTTTCCTAAACCTAAATAatcatgagctgaagtaaaatatcccagaaatgttccatacacacaaaaagcttatttctctcaaatgtttgcttacatccctgttagagagcatttctcctttgccaagataatccatccacctgacaggtgtggcatatcaagaagctggttaaacagcatgatcattacacaggtgcaccttgtgctggggaaaataaaaggccattctgaaatgtgcagctttgtcacacaacacaatgccacagatgtctcaagttttgatggatcgtgc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1091552 True 310 lncRNA 0.39 1 24151974 24152283

Neighbor

gene id symbol gene type direction distance location
dtx3l1 LOC106578522 coding upstream 2303 24146476 ~ 24149671 (+)
c1ql3a c1ql3 coding upstream 48264 24097090 ~ 24103710 (+)
rsu1 rsu1 coding upstream 56989 24058724 ~ 24094985 (+)
cubn cubn coding upstream 102386 23996588 ~ 24049588 (+)
trdmt1 trdmt1 coding upstream 155712 23977348 ~ 23996262 (+)
LOC110535520 LOC106578523 coding downstream 20813 24173096 ~ 24188768 (+)
steap2 steap2 coding downstream 36858 24189141 ~ 24198511 (+)
LOC110535521 mmp16 coding downstream 143206 24295489 ~ 24367062 (+)
LOC110535524 LOC106578570 coding downstream 345671 24497954 ~ 24532037 (+)
cngb3.1 LOC106578566 coding downstream 380796 24533079 ~ 24566994 (+)
G957407 NA non-coding upstream 10290 24141445 ~ 24141684 (+)
G957406 NA non-coding upstream 10668 24140823 ~ 24141306 (+)
G957344 NA non-coding upstream 160850 23990555 ~ 23991124 (+)
G957316 LOC106583515 non-coding upstream 218505 23933013 ~ 23933469 (+)
G957415 NA non-coding downstream 788 24153071 ~ 24153331 (+)
G957417 NA non-coding downstream 3459 24155742 ~ 24156009 (+)
G957391 NA non-coding downstream 47102 24199385 ~ 24199770 (+)
G957432 NA non-coding downstream 51502 24203785 ~ 24203992 (+)
G957452 NA non-coding downstream 80455 24232738 ~ 24232993 (+)
G956797 NA other upstream 375129 23775772 ~ 23776845 (+)
G956728 LOC106613263 other upstream 486044 23665288 ~ 23665930 (+)
tlcd4a LOC106570700 other upstream 1410727 22712577 ~ 22741263 (+)
phldb2b tcpe other upstream 4382621 19740565 ~ 19799150 (+)
G951511 NA other upstream 5024889 19126665 ~ 19127085 (+)
G957942 NA other downstream 448188 24600471 ~ 24601653 (+)
G958300 idi1 other downstream 642317 24794600 ~ 24795736 (+)
G960696 LOC106583976 other downstream 2561342 26713625 ~ 26797294 (+)
G960816 armc4 other downstream 2776393 26928676 ~ 26929027 (+)
bambia LOC106578551 other downstream 3256719 27409002 ~ 27412913 (+)

Expression


Co-expression Network