Gene
RNA
| Item | Value |
|---|---|
| gene id | G957415 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 24153071 ~ 24153331 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| reverse transcriptase-like protein |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1091553 | True | 261 | lncRNA | 0.56 | 1 | 24153071 | 24153331 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| dtx3l1 | LOC106578522 | coding | upstream | 3400 | 24146476 ~ 24149671 (+) |
| c1ql3a | c1ql3 | coding | upstream | 49361 | 24097090 ~ 24103710 (+) |
| rsu1 | rsu1 | coding | upstream | 58086 | 24058724 ~ 24094985 (+) |
| cubn | cubn | coding | upstream | 103483 | 23996588 ~ 24049588 (+) |
| trdmt1 | trdmt1 | coding | upstream | 156809 | 23977348 ~ 23996262 (+) |
| LOC110535520 | LOC106578523 | coding | downstream | 19765 | 24173096 ~ 24188768 (+) |
| steap2 | steap2 | coding | downstream | 35810 | 24189141 ~ 24198511 (+) |
| LOC110535521 | mmp16 | coding | downstream | 142158 | 24295489 ~ 24367062 (+) |
| LOC110535524 | LOC106578570 | coding | downstream | 344623 | 24497954 ~ 24532037 (+) |
| cngb3.1 | LOC106578566 | coding | downstream | 379748 | 24533079 ~ 24566994 (+) |
| G957414 | NA | non-coding | upstream | 788 | 24151974 ~ 24152283 (+) |
| G957407 | NA | non-coding | upstream | 11387 | 24141445 ~ 24141684 (+) |
| G957406 | NA | non-coding | upstream | 11765 | 24140823 ~ 24141306 (+) |
| G957344 | NA | non-coding | upstream | 161947 | 23990555 ~ 23991124 (+) |
| G957417 | NA | non-coding | downstream | 2411 | 24155742 ~ 24156009 (+) |
| G957391 | NA | non-coding | downstream | 46054 | 24199385 ~ 24199770 (+) |
| G957432 | NA | non-coding | downstream | 50454 | 24203785 ~ 24203992 (+) |
| G957452 | NA | non-coding | downstream | 79407 | 24232738 ~ 24232993 (+) |
| G957738 | NA | non-coding | downstream | 117857 | 24271188 ~ 24271403 (+) |
| G956797 | NA | other | upstream | 376226 | 23775772 ~ 23776845 (+) |
| G956728 | LOC106613263 | other | upstream | 487141 | 23665288 ~ 23665930 (+) |
| tlcd4a | LOC106570700 | other | upstream | 1411824 | 22712577 ~ 22741263 (+) |
| phldb2b | tcpe | other | upstream | 4383718 | 19740565 ~ 19799150 (+) |
| G951511 | NA | other | upstream | 5025986 | 19126665 ~ 19127085 (+) |
| G957942 | NA | other | downstream | 447140 | 24600471 ~ 24601653 (+) |
| G958300 | idi1 | other | downstream | 641269 | 24794600 ~ 24795736 (+) |
| G960696 | LOC106583976 | other | downstream | 2560294 | 26713625 ~ 26797294 (+) |
| G960816 | armc4 | other | downstream | 2775345 | 26928676 ~ 26929027 (+) |
| bambia | LOC106578551 | other | downstream | 3255671 | 27409002 ~ 27412913 (+) |
