G957964


Basic Information

Item Value
gene id G957964
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 24468210 ~ 24468665 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1092150
cgctgcaggagggtactggtgcacttcacaaaatagatggcatcatgaggtaggaaagttatgtggatatattgaagcaacatctcaagacatcagtcaggaagttaacctttctagcgcaggggtTCCGCCTCGACAACATTTtgctgaaaaggcagtgcgcgaaattcaaaaatatctgtttgaaatatgtaactttcacacattaacaagtccaatacagcaaatgaaagataaacatcttgttaatctacccatcgtgtccgatttcaaaagtgctttacagcgaaagcaccacatatGTTAGATCATAGCCAAGTCGAAGAaatacacagccatttttccagccaaagataggagtcacaaaaagcagaaatatagattaaattaatcactaacccttgatgatcttcatcagatgacactcataggacatcatgttacacaatacatgta

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1092150 True 456 lncRNA 0.39 1 24468210 24468665

Neighbor

gene id symbol gene type direction distance location
LOC110535521 mmp16 coding upstream 101148 24295489 ~ 24367062 (+)
steap2 steap2 coding upstream 269699 24189141 ~ 24198511 (+)
LOC110535520 LOC106578523 coding upstream 279442 24173096 ~ 24188768 (+)
dtx3l1 LOC106578522 coding upstream 318539 24146476 ~ 24149671 (+)
c1ql3a c1ql3 coding upstream 364500 24097090 ~ 24103710 (+)
LOC110535524 LOC106578570 coding downstream 29289 24497954 ~ 24532037 (+)
cngb3.1 LOC106578566 coding downstream 64414 24533079 ~ 24566994 (+)
rmdn1 rmdn1 coding downstream 122458 24591123 ~ 24599218 (+)
LOC118937338 NA coding downstream 263705 24732370 ~ 24746682 (+)
LOC110535530 LOC106578529 coding downstream 328581 24797246 ~ 24827022 (+)
G957920 NA non-coding upstream 45511 24422416 ~ 24422699 (+)
G957740 NA non-coding upstream 141135 24272570 ~ 24327075 (+)
G957767 NA non-coding upstream 148665 24318887 ~ 24319545 (+)
G957748 NA non-coding upstream 179712 24285508 ~ 24288498 (+)
G957738 NA non-coding upstream 196807 24271188 ~ 24271403 (+)
G958002 NA non-coding downstream 70431 24539096 ~ 24539325 (+)
G958007 NA non-coding downstream 76371 24545036 ~ 24545304 (+)
G958008 NA non-coding downstream 77055 24545720 ~ 24545989 (+)
G958080 NA non-coding downstream 217392 24686057 ~ 24686281 (+)
G958081 LOC106573797 non-coding downstream 217972 24686637 ~ 24687109 (+)
G956797 NA other upstream 691365 23775772 ~ 23776845 (+)
G956728 LOC106613263 other upstream 802280 23665288 ~ 23665930 (+)
tlcd4a LOC106570700 other upstream 1726963 22712577 ~ 22741263 (+)
phldb2b tcpe other upstream 4698857 19740565 ~ 19799150 (+)
G951511 NA other upstream 5341125 19126665 ~ 19127085 (+)
G957942 NA other downstream 131806 24600471 ~ 24601653 (+)
G958300 idi1 other downstream 325935 24794600 ~ 24795736 (+)
G960696 LOC106583976 other downstream 2244960 26713625 ~ 26797294 (+)
G960816 armc4 other downstream 2460011 26928676 ~ 26929027 (+)
bambia LOC106578551 other downstream 2940337 27409002 ~ 27412913 (+)

Expression


Co-expression Network