G958002


Basic Information

Item Value
gene id G958002
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 24539096 ~ 24539325 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1092189
agatcATACTTTatgtaacaaaaatagaactgttcattcttcaaataaagtggtgatcctaactgacctaagacagggaatttttactaggattaaatgtcagaaattgtgaaaaactgagtttaaatgtatttggctaagctgtatgtaaacttctgacttcaactgtatatggatgATTGATGGCTGttcggcataggcaagatgcagtagatggtatagaatacagt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1092189 True 230 lncRNA 0.33 1 24539096 24539325

Neighbor

gene id symbol gene type direction distance location
LOC110535524 LOC106578570 coding upstream 7059 24497954 ~ 24532037 (+)
LOC110535521 mmp16 coding upstream 172034 24295489 ~ 24367062 (+)
steap2 steap2 coding upstream 340585 24189141 ~ 24198511 (+)
LOC110535520 LOC106578523 coding upstream 350328 24173096 ~ 24188768 (+)
dtx3l1 LOC106578522 coding upstream 389425 24146476 ~ 24149671 (+)
rmdn1 rmdn1 coding downstream 51798 24591123 ~ 24599218 (+)
LOC118937338 NA coding downstream 193045 24732370 ~ 24746682 (+)
LOC110535530 LOC106578529 coding downstream 257921 24797246 ~ 24827022 (+)
pfkpa LOC106578535 coding downstream 655128 25194453 ~ 25222665 (+)
fzd8a LOC106578536 coding downstream 1188736 25728061 ~ 25730806 (+)
G957964 NA non-coding upstream 70431 24468210 ~ 24468665 (+)
G957920 NA non-coding upstream 116397 24422416 ~ 24422699 (+)
G957740 NA non-coding upstream 212021 24272570 ~ 24327075 (+)
G957767 NA non-coding upstream 219551 24318887 ~ 24319545 (+)
G957748 NA non-coding upstream 250598 24285508 ~ 24288498 (+)
G958007 NA non-coding downstream 5711 24545036 ~ 24545304 (+)
G958008 NA non-coding downstream 6395 24545720 ~ 24545989 (+)
G958080 NA non-coding downstream 146732 24686057 ~ 24686281 (+)
G958081 LOC106573797 non-coding downstream 147312 24686637 ~ 24687109 (+)
G958304 NA non-coding downstream 217828 24757153 ~ 24757640 (+)
G956797 NA other upstream 762251 23775772 ~ 23776845 (+)
G956728 LOC106613263 other upstream 873166 23665288 ~ 23665930 (+)
tlcd4a LOC106570700 other upstream 1797849 22712577 ~ 22741263 (+)
phldb2b tcpe other upstream 4769743 19740565 ~ 19799150 (+)
G951511 NA other upstream 5412011 19126665 ~ 19127085 (+)
G957942 NA other downstream 61146 24600471 ~ 24601653 (+)
G958300 idi1 other downstream 255275 24794600 ~ 24795736 (+)
G960696 LOC106583976 other downstream 2174300 26713625 ~ 26797294 (+)
G960816 armc4 other downstream 2389351 26928676 ~ 26929027 (+)
bambia LOC106578551 other downstream 2869677 27409002 ~ 27412913 (+)

Expression


Co-expression Network