Gene
RNA
| Item | Value |
|---|---|
| gene id | G958008 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 24545720 ~ 24545989 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1092195 | True | 270 | lncRNA | 0.40 | 1 | 24545720 | 24545989 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110535524 | LOC106578570 | coding | upstream | 13683 | 24497954 ~ 24532037 (+) |
| LOC110535521 | mmp16 | coding | upstream | 178658 | 24295489 ~ 24367062 (+) |
| steap2 | steap2 | coding | upstream | 347209 | 24189141 ~ 24198511 (+) |
| LOC110535520 | LOC106578523 | coding | upstream | 356952 | 24173096 ~ 24188768 (+) |
| dtx3l1 | LOC106578522 | coding | upstream | 396049 | 24146476 ~ 24149671 (+) |
| rmdn1 | rmdn1 | coding | downstream | 45134 | 24591123 ~ 24599218 (+) |
| LOC118937338 | NA | coding | downstream | 186381 | 24732370 ~ 24746682 (+) |
| LOC110535530 | LOC106578529 | coding | downstream | 251257 | 24797246 ~ 24827022 (+) |
| pfkpa | LOC106578535 | coding | downstream | 648464 | 25194453 ~ 25222665 (+) |
| fzd8a | LOC106578536 | coding | downstream | 1182072 | 25728061 ~ 25730806 (+) |
| G958007 | NA | non-coding | upstream | 416 | 24545036 ~ 24545304 (+) |
| G958002 | NA | non-coding | upstream | 6395 | 24539096 ~ 24539325 (+) |
| G957964 | NA | non-coding | upstream | 77055 | 24468210 ~ 24468665 (+) |
| G957920 | NA | non-coding | upstream | 123021 | 24422416 ~ 24422699 (+) |
| G957767 | NA | non-coding | upstream | 226175 | 24318887 ~ 24319545 (+) |
| G958080 | NA | non-coding | downstream | 140068 | 24686057 ~ 24686281 (+) |
| G958081 | LOC106573797 | non-coding | downstream | 140648 | 24686637 ~ 24687109 (+) |
| G958304 | NA | non-coding | downstream | 211164 | 24757153 ~ 24757640 (+) |
| G958345 | NA | non-coding | downstream | 305566 | 24851555 ~ 24851762 (+) |
| G958347 | NA | non-coding | downstream | 307243 | 24853232 ~ 24853618 (+) |
| G956797 | NA | other | upstream | 768875 | 23775772 ~ 23776845 (+) |
| G956728 | LOC106613263 | other | upstream | 879790 | 23665288 ~ 23665930 (+) |
| tlcd4a | LOC106570700 | other | upstream | 1804473 | 22712577 ~ 22741263 (+) |
| phldb2b | tcpe | other | upstream | 4776367 | 19740565 ~ 19799150 (+) |
| G951511 | NA | other | upstream | 5418635 | 19126665 ~ 19127085 (+) |
| G957942 | NA | other | downstream | 54482 | 24600471 ~ 24601653 (+) |
| G958300 | idi1 | other | downstream | 248611 | 24794600 ~ 24795736 (+) |
| G960696 | LOC106583976 | other | downstream | 2167636 | 26713625 ~ 26797294 (+) |
| G960816 | armc4 | other | downstream | 2382687 | 26928676 ~ 26929027 (+) |
| bambia | LOC106578551 | other | downstream | 2863013 | 27409002 ~ 27412913 (+) |
