G957942


Basic Information

Item Value
gene id G957942
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 24600471 ~ 24601653 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1092128
acagatcttcattgtaaagcgtttaaacaccgtttcccatcCTTGTTcaatgcacctgtggaacggtcgttaagacaataacagcttacagatggtcggcaactaaggtcacagttatgaacatttaggacactaaagaggcctaaggactctgaaaaacaccagaagaaagatgcccagggtccccgctcatctgcgtgaacgtgccttaggcatgcttcaaggaggcatgaggactgcagatgtggcccgGGCAATagattgcaatgtccgtactgtgagacgcctaagacagccctacagggagacaggacggacagctgatcatcctcgcaatggcagaccacgtgtaacaaaccctgcacaggattggtacatccgcaCATCACACCTgccggacaggtacaggatggcaacaactgcctgagttacaccaggatcacacaatccctccatcagtgcacaggctgtctgcaataggctgagagaggctggactgaggggttgtaggcctgttgtaaggcaggtcctcaccagacttcaccggcaacaacgtcggctatgggcacaaacccaccgtcgctggaccagacaggtttggcaaaaagtgctcttcactgacaagttgcggttttgtctcaccaggggtgatggtcagatccgcgcttatcgtcgaaggaatgagcgttacactgaggcctgtactctggagcgggattgagttggaggtggagggtccgtcatggtctgggggcggtgtgtcacagcatcgtcggactgagcttgttgtcattgcatgcaatctcaatgctgtgcattacagggaagacatcctaaTCCCTCATGcagtacccttcctgcaggctcatcctgtcatgaccctccagcatgacaatgccaccagccatactgctcgttctgtgcatgatttcctgcaagacaaatgttagtgttctgccatggccagtgaagagcccggatctcgaTCCAACAGcggagggtgaggactagggccattccccccagaaatgtccgggaacttgcaggtgccttagtggaagagtggggtaacatctcacagcaagaactggcaaatctggtgcagtccatgaggagatgcattgcagtacttaatgcagctggtggccacaccagatactgactgttacttttgacccccccc

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1092128 True 1183 TUCP 0.53 1 24600471 24601653

Neighbor

gene id symbol gene type direction distance location
rmdn1 rmdn1 coding upstream 1253 24591123 ~ 24599218 (+)
cngb3.1 LOC106578566 coding upstream 33477 24533079 ~ 24566994 (+)
LOC110535524 LOC106578570 coding upstream 68434 24497954 ~ 24532037 (+)
LOC110535521 mmp16 coding upstream 233409 24295489 ~ 24367062 (+)
steap2 steap2 coding upstream 401960 24189141 ~ 24198511 (+)
LOC118937338 NA coding downstream 130717 24732370 ~ 24746682 (+)
LOC110535530 LOC106578529 coding downstream 195593 24797246 ~ 24827022 (+)
pfkpa LOC106578535 coding downstream 592800 25194453 ~ 25222665 (+)
fzd8a LOC106578536 coding downstream 1126408 25728061 ~ 25730806 (+)
LOC110536590 cul2 coding downstream 1233320 25834973 ~ 25856195 (+)
G958008 NA non-coding upstream 54482 24545720 ~ 24545989 (+)
G958007 NA non-coding upstream 55167 24545036 ~ 24545304 (+)
G958002 NA non-coding upstream 61146 24539096 ~ 24539325 (+)
G957964 NA non-coding upstream 131806 24468210 ~ 24468665 (+)
G957920 NA non-coding upstream 177772 24422416 ~ 24422699 (+)
G958080 NA non-coding downstream 84404 24686057 ~ 24686281 (+)
G958081 LOC106573797 non-coding downstream 84984 24686637 ~ 24687109 (+)
G958304 NA non-coding downstream 155500 24757153 ~ 24757640 (+)
G958345 NA non-coding downstream 249902 24851555 ~ 24851762 (+)
G958347 NA non-coding downstream 251579 24853232 ~ 24853618 (+)
G956797 NA other upstream 823626 23775772 ~ 23776845 (+)
G956728 LOC106613263 other upstream 934541 23665288 ~ 23665930 (+)
tlcd4a LOC106570700 other upstream 1859224 22712577 ~ 22741263 (+)
phldb2b tcpe other upstream 4831118 19740565 ~ 19799150 (+)
G951511 NA other upstream 5473386 19126665 ~ 19127085 (+)
G958300 idi1 other downstream 192947 24794600 ~ 24795736 (+)
G960696 LOC106583976 other downstream 2111972 26713625 ~ 26797294 (+)
G960816 armc4 other downstream 2327023 26928676 ~ 26929027 (+)
bambia LOC106578551 other downstream 2807349 27409002 ~ 27412913 (+)
mtpap LOC106578552 other downstream 3161335 27739381 ~ 27765414 (+)

Expression


Co-expression Network