G958304


Basic Information

Item Value
gene id G958304
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 24757153 ~ 24757640 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1092518
GTAGTGTTGTTTCCAAGAGAGCGGTCGAAGAACAGTGTATTCCATGCAAAATAATTGGACTATAGACTGCAACATATTACACATACAACTAAACACATCGTTAAGGGGAATATAACACACCCAATAAAACTGTCTCTCCGTAACATTTGAAATCTGGCGCATATGAAACATACTGAGTGTAAAAtacattaggaacatctgctgTTTACgaaacatagactgaccaggtgaaagctaggatcccttattgatttcacatgttaaatccacttcaatcagtgtagatgaagaggaggagacgggttaaagaaggattttaagacttgaaacaattgagacatggattgtgtatgtgtcccattcagagggtgaatgggaaagacaaaatatttaaatgcctttgaaatgggtatggtagcaggtgccaggccTATGGGTTTGTGCCAAGAACAGCAACGCAGGGCCTCCCGGAttgtgcagtggttaag

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1092518 True 488 lncRNA 0.41 1 24757153 24757640
Loading

Neighbor

gene id symbol gene type direction distance location
LOC118937338 NA coding upstream 10471 24732370 ~ 24746682 (+)
rmdn1 rmdn1 coding upstream 157935 24591123 ~ 24599218 (+)
cngb3.1 LOC106578566 coding upstream 190159 24533079 ~ 24566994 (+)
LOC110535524 LOC106578570 coding upstream 225116 24497954 ~ 24532037 (+)
LOC110535521 mmp16 coding upstream 390091 24295489 ~ 24367062 (+)
LOC110535530 LOC106578529 coding downstream 39606 24797246 ~ 24827022 (+)
pfkpa LOC106578535 coding downstream 436813 25194453 ~ 25222665 (+)
fzd8a LOC106578536 coding downstream 970421 25728061 ~ 25730806 (+)
LOC110536590 cul2 coding downstream 1077333 25834973 ~ 25856195 (+)
LOC110535542 LOC106578541 coding downstream 1101205 25858845 ~ 26401631 (+)
G958081 LOC106573797 non-coding upstream 70044 24686637 ~ 24687109 (+)
G958080 NA non-coding upstream 70872 24686057 ~ 24686281 (+)
G958008 NA non-coding upstream 211164 24545720 ~ 24545989 (+)
G958007 NA non-coding upstream 211849 24545036 ~ 24545304 (+)
G958002 NA non-coding upstream 217828 24539096 ~ 24539325 (+)
G958345 NA non-coding downstream 93915 24851555 ~ 24851762 (+)
G958347 NA non-coding downstream 95592 24853232 ~ 24853618 (+)
G958350 NA non-coding downstream 101221 24858861 ~ 24859069 (+)
G958363 adarb2 non-coding downstream 133641 24891281 ~ 24891985 (+)
G958381 NA non-coding downstream 159476 24917116 ~ 24917963 (+)
G957942 NA other upstream 155500 24600471 ~ 24601653 (+)
G956797 NA other upstream 980308 23775772 ~ 23776845 (+)
G956728 LOC106613263 other upstream 1091223 23665288 ~ 23665930 (+)
tlcd4a LOC106570700 other upstream 2015906 22712577 ~ 22741263 (+)
phldb2b tcpe other upstream 4987800 19740565 ~ 19799150 (+)
G958300 idi1 other downstream 36960 24794600 ~ 24795736 (+)
G960696 LOC106583976 other downstream 1955985 26713625 ~ 26797294 (+)
G960816 armc4 other downstream 2171036 26928676 ~ 26929027 (+)
bambia LOC106578551 other downstream 2651362 27409002 ~ 27412913 (+)
mtpap LOC106578552 other downstream 3005348 27739381 ~ 27765414 (+)

Expression

G958304 Expression in all Baseline Samples

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G958304 Expression in each Bioproject

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G958304 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 40.
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Co-expression Network