Gene
RNA
| Item | Value |
|---|---|
| gene id | G958300 |
| gene name | idi1 |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 24794600 ~ 24795736 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| idi1 | Predicted to enable isopentenyl-diphosphate delta-isomerase activity. Predicted to be involved in isopentenyl diphosphate biosynthetic process. Predicted to act upstream of or within isoprenoid biosynthetic process. Predicted to be active in cytoplasm. Orthologous to several human genes including IDI1 (isopentenyl-diphosphate delta isomerase 1). |
| description |
|---|
| PREDICTED: isopentenyl-diphosphate Delta-isomerase 1 isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1092512 | True | 888 | TUCP | 0.42 | 2 | 24794600 | 24795736 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118937338 | NA | coding | upstream | 47918 | 24732370 ~ 24746682 (+) |
| rmdn1 | rmdn1 | coding | upstream | 195382 | 24591123 ~ 24599218 (+) |
| cngb3.1 | LOC106578566 | coding | upstream | 227606 | 24533079 ~ 24566994 (+) |
| LOC110535524 | LOC106578570 | coding | upstream | 262563 | 24497954 ~ 24532037 (+) |
| LOC110535521 | mmp16 | coding | upstream | 427538 | 24295489 ~ 24367062 (+) |
| LOC110535530 | LOC106578529 | coding | downstream | 1510 | 24797246 ~ 24827022 (+) |
| pfkpa | LOC106578535 | coding | downstream | 398717 | 25194453 ~ 25222665 (+) |
| fzd8a | LOC106578536 | coding | downstream | 932325 | 25728061 ~ 25730806 (+) |
| LOC110536590 | cul2 | coding | downstream | 1039237 | 25834973 ~ 25856195 (+) |
| LOC110535542 | LOC106578541 | coding | downstream | 1063109 | 25858845 ~ 26401631 (+) |
| G958304 | NA | non-coding | upstream | 36960 | 24757153 ~ 24757640 (+) |
| G958081 | LOC106573797 | non-coding | upstream | 107491 | 24686637 ~ 24687109 (+) |
| G958080 | NA | non-coding | upstream | 108319 | 24686057 ~ 24686281 (+) |
| G958008 | NA | non-coding | upstream | 248611 | 24545720 ~ 24545989 (+) |
| G958007 | NA | non-coding | upstream | 249296 | 24545036 ~ 24545304 (+) |
| G958345 | NA | non-coding | downstream | 55819 | 24851555 ~ 24851762 (+) |
| G958347 | NA | non-coding | downstream | 57496 | 24853232 ~ 24853618 (+) |
| G958350 | NA | non-coding | downstream | 63125 | 24858861 ~ 24859069 (+) |
| G958363 | adarb2 | non-coding | downstream | 95545 | 24891281 ~ 24891985 (+) |
| G958381 | NA | non-coding | downstream | 121380 | 24917116 ~ 24917963 (+) |
| G957942 | NA | other | upstream | 192947 | 24600471 ~ 24601653 (+) |
| G956797 | NA | other | upstream | 1017755 | 23775772 ~ 23776845 (+) |
| G956728 | LOC106613263 | other | upstream | 1128670 | 23665288 ~ 23665930 (+) |
| tlcd4a | LOC106570700 | other | upstream | 2053353 | 22712577 ~ 22741263 (+) |
| phldb2b | tcpe | other | upstream | 5025247 | 19740565 ~ 19799150 (+) |
| G960696 | LOC106583976 | other | downstream | 1917889 | 26713625 ~ 26797294 (+) |
| G960816 | armc4 | other | downstream | 2132940 | 26928676 ~ 26929027 (+) |
| bambia | LOC106578551 | other | downstream | 2613266 | 27409002 ~ 27412913 (+) |
| mtpap | LOC106578552 | other | downstream | 2967252 | 27739381 ~ 27765414 (+) |
| G961864 | NA | other | downstream | 3033010 | 27828746 ~ 27829177 (+) |
