G958347


Basic Information

Item Value
gene id G958347
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 24853232 ~ 24853618 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1092567
TACTTGTAAGGATAATTAGTAAAACACCCCTGCCTACTCTTGTACTATTCAAAGGAGACAAATTAGATGTTATTACTGAGAGTAGAGGAAGCACAGCAACACTTTACTTAAAGCCTACAGGTATAATGTTTCTATTAGATGTTAGAAACTTGTATGAGCCCTTACGACGAGGCCTTATAATACGGTTTATAATATGTTACAGAAGCCTTCGATGTCGTTACCTTAAGAAGAGCTCTAACTGAGAGTAGAGGTAGCGAACCAAGGCTCTCCTGGCTGTGATCTCAGCGTGACAGTCGTTGACCACCAGTCCTTGGTTACTGATATGTTCTCCCTTGATACATTTGGTCCCGGTAGATAACGCTATCACCTGGACTTGTCTCAGGTCCA

Function

NR:

description
double-stranded RNA-specific editase B2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1092567 True 387 lncRNA 0.42 1 24853232 24853618

Neighbor

gene id symbol gene type direction distance location
LOC110535530 LOC106578529 coding upstream 26210 24797246 ~ 24827022 (+)
LOC118937338 NA coding upstream 106550 24732370 ~ 24746682 (+)
rmdn1 rmdn1 coding upstream 254014 24591123 ~ 24599218 (+)
cngb3.1 LOC106578566 coding upstream 286238 24533079 ~ 24566994 (+)
LOC110535524 LOC106578570 coding upstream 321195 24497954 ~ 24532037 (+)
pfkpa LOC106578535 coding downstream 340835 25194453 ~ 25222665 (+)
fzd8a LOC106578536 coding downstream 874443 25728061 ~ 25730806 (+)
LOC110536590 cul2 coding downstream 981355 25834973 ~ 25856195 (+)
LOC110535542 LOC106578541 coding downstream 1005227 25858845 ~ 26401631 (+)
LOC110536591 LOC106578544 coding downstream 1764530 26618148 ~ 26700276 (+)
G958345 NA non-coding upstream 1470 24851555 ~ 24851762 (+)
G958304 NA non-coding upstream 95592 24757153 ~ 24757640 (+)
G958081 LOC106573797 non-coding upstream 166123 24686637 ~ 24687109 (+)
G958080 NA non-coding upstream 166951 24686057 ~ 24686281 (+)
G958008 NA non-coding upstream 307243 24545720 ~ 24545989 (+)
G958350 NA non-coding downstream 5243 24858861 ~ 24859069 (+)
G958363 adarb2 non-coding downstream 37663 24891281 ~ 24891985 (+)
G958381 NA non-coding downstream 63498 24917116 ~ 24917963 (+)
G958385 NA non-coding downstream 68024 24921642 ~ 24921841 (+)
G958411 NA non-coding downstream 107692 24961310 ~ 25033493 (+)
G958300 idi1 other upstream 57496 24794600 ~ 24795736 (+)
G957942 NA other upstream 251579 24600471 ~ 24601653 (+)
G956797 NA other upstream 1076387 23775772 ~ 23776845 (+)
G956728 LOC106613263 other upstream 1187302 23665288 ~ 23665930 (+)
tlcd4a LOC106570700 other upstream 2111985 22712577 ~ 22741263 (+)
G960696 LOC106583976 other downstream 1860007 26713625 ~ 26797294 (+)
G960816 armc4 other downstream 2075058 26928676 ~ 26929027 (+)
bambia LOC106578551 other downstream 2555384 27409002 ~ 27412913 (+)
mtpap LOC106578552 other downstream 2909370 27739381 ~ 27765414 (+)
G961864 NA other downstream 2975128 27828746 ~ 27829177 (+)

Expression


Co-expression Network