G958350


Basic Information

Item Value
gene id G958350
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 24858861 ~ 24859069 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1092570
ttcctgcagtcatcatgccaattgcacactccctcaaaacttgagacatcgtgttgtgtgacaaaactgcacattttagagtggtcttttattgtccacagcacaaggtgcacctgtgtaatgaccatgccgtttaatcaacttcttgatatgccacaccagtcaggtggatggattatcttggcaaagaagaaatgctcactaacagg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1092570 True 209 lncRNA 0.44 1 24858861 24859069

Neighbor

gene id symbol gene type direction distance location
LOC110535530 LOC106578529 coding upstream 31839 24797246 ~ 24827022 (+)
LOC118937338 NA coding upstream 112179 24732370 ~ 24746682 (+)
rmdn1 rmdn1 coding upstream 259643 24591123 ~ 24599218 (+)
cngb3.1 LOC106578566 coding upstream 291867 24533079 ~ 24566994 (+)
LOC110535524 LOC106578570 coding upstream 326824 24497954 ~ 24532037 (+)
pfkpa LOC106578535 coding downstream 335384 25194453 ~ 25222665 (+)
fzd8a LOC106578536 coding downstream 868992 25728061 ~ 25730806 (+)
LOC110536590 cul2 coding downstream 975904 25834973 ~ 25856195 (+)
LOC110535542 LOC106578541 coding downstream 999776 25858845 ~ 26401631 (+)
LOC110536591 LOC106578544 coding downstream 1759079 26618148 ~ 26700276 (+)
G958347 NA non-coding upstream 5243 24853232 ~ 24853618 (+)
G958345 NA non-coding upstream 7099 24851555 ~ 24851762 (+)
G958304 NA non-coding upstream 101221 24757153 ~ 24757640 (+)
G958081 LOC106573797 non-coding upstream 171752 24686637 ~ 24687109 (+)
G958080 NA non-coding upstream 172580 24686057 ~ 24686281 (+)
G958363 adarb2 non-coding downstream 32212 24891281 ~ 24891985 (+)
G958381 NA non-coding downstream 58047 24917116 ~ 24917963 (+)
G958385 NA non-coding downstream 62573 24921642 ~ 24921841 (+)
G958411 NA non-coding downstream 102241 24961310 ~ 25033493 (+)
G958674 NA non-coding downstream 191392 25050461 ~ 25050699 (+)
G958300 idi1 other upstream 63125 24794600 ~ 24795736 (+)
G957942 NA other upstream 257208 24600471 ~ 24601653 (+)
G956797 NA other upstream 1082016 23775772 ~ 23776845 (+)
G956728 LOC106613263 other upstream 1192931 23665288 ~ 23665930 (+)
tlcd4a LOC106570700 other upstream 2117614 22712577 ~ 22741263 (+)
G960696 LOC106583976 other downstream 1854556 26713625 ~ 26797294 (+)
G960816 armc4 other downstream 2069607 26928676 ~ 26929027 (+)
bambia LOC106578551 other downstream 2549933 27409002 ~ 27412913 (+)
mtpap LOC106578552 other downstream 2903919 27739381 ~ 27765414 (+)
G961864 NA other downstream 2969677 27828746 ~ 27829177 (+)

Expression


Co-expression Network