G959183


Basic Information

Item Value
gene id G959183
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 25474333 ~ 25474569 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1093436
tcacaaggtaggacaattatgtggatatattgaaacaacatctcaagacgtcagtcaggaagttaaatcttggtcgcaaatgggtcttccaaatggacaattaccccaagcatacttccaaagttgtggcaaaatggcttaaggacaacaaagacaaggtattggagtggccatcacaaagccctgatctcaatcccatagaaaatgtgtgggaagaactgaaaaagcatgtgtgag

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1093436 True 237 lncRNA 0.41 1 25474333 25474569

Neighbor

gene id symbol gene type direction distance location
pfkpa LOC106578535 coding upstream 251668 25194453 ~ 25222665 (+)
LOC110535530 LOC106578529 coding upstream 647311 24797246 ~ 24827022 (+)
LOC118937338 NA coding upstream 727651 24732370 ~ 24746682 (+)
rmdn1 rmdn1 coding upstream 875115 24591123 ~ 24599218 (+)
cngb3.1 LOC106578566 coding upstream 907339 24533079 ~ 24566994 (+)
fzd8a LOC106578536 coding downstream 253492 25728061 ~ 25730806 (+)
LOC110536590 cul2 coding downstream 360404 25834973 ~ 25856195 (+)
LOC110535542 LOC106578541 coding downstream 384276 25858845 ~ 26401631 (+)
LOC110536591 LOC106578544 coding downstream 1143579 26618148 ~ 26700276 (+)
LOC118936350 NA coding downstream 1239026 26713595 ~ 26751558 (+)
G959156 NA non-coding upstream 18932 25455172 ~ 25455401 (+)
G959150 NA non-coding upstream 23533 25450423 ~ 25450800 (+)
G959092 NA non-coding upstream 72302 25401803 ~ 25402031 (+)
G959056 NA non-coding upstream 100531 25372900 ~ 25373802 (+)
G959054 NA non-coding upstream 102711 25371393 ~ 25371622 (+)
G959212 NA non-coding downstream 17808 25492377 ~ 25492710 (+)
G959371 NA non-coding downstream 149862 25624431 ~ 25624677 (+)
G959401 NA non-coding downstream 170980 25645549 ~ 25645782 (+)
G959454 NA non-coding downstream 209480 25684049 ~ 25684272 (+)
G959463 NA non-coding downstream 214195 25688764 ~ 25688988 (+)
G958300 idi1 other upstream 678597 24794600 ~ 24795736 (+)
G957942 NA other upstream 872680 24600471 ~ 24601653 (+)
G956797 NA other upstream 1697488 23775772 ~ 23776845 (+)
G956728 LOC106613263 other upstream 1808403 23665288 ~ 23665930 (+)
tlcd4a LOC106570700 other upstream 2733086 22712577 ~ 22741263 (+)
G960696 LOC106583976 other downstream 1239056 26713625 ~ 26797294 (+)
G960816 armc4 other downstream 1454107 26928676 ~ 26929027 (+)
bambia LOC106578551 other downstream 1934433 27409002 ~ 27412913 (+)
mtpap LOC106578552 other downstream 2288419 27739381 ~ 27765414 (+)
G961864 NA other downstream 2354177 27828746 ~ 27829177 (+)

Expression


Co-expression Network