G959212


Basic Information

Item Value
gene id G959212
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 25492377 ~ 25492710 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1093465
gccacaaaaggaccagctgacatcttGTCAGTGATTAttttgttaacacaggtgtgagtgttgactaggacaaggctggagatcactctgtcatgctgaatgagttcgaataacagactggaagcttcaaaaggagggtgatgcttggaatcattgttcttcctctgtcaatcatagTTACCTGCAAGTAAACACGTGCAGTCAtcatttgcacaaaaagggcttcacaggcaaggatattgctgccagtatgattgcacctaaatcaaccatttatcagatcattaagaacttcaaggagagcggttcaattgttgtgaagaaggcttcaggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1093465 True 334 lncRNA 0.43 1 25492377 25492710

Neighbor

gene id symbol gene type direction distance location
pfkpa LOC106578535 coding upstream 269712 25194453 ~ 25222665 (+)
LOC110535530 LOC106578529 coding upstream 665355 24797246 ~ 24827022 (+)
LOC118937338 NA coding upstream 745695 24732370 ~ 24746682 (+)
rmdn1 rmdn1 coding upstream 893159 24591123 ~ 24599218 (+)
cngb3.1 LOC106578566 coding upstream 925383 24533079 ~ 24566994 (+)
fzd8a LOC106578536 coding downstream 235351 25728061 ~ 25730806 (+)
LOC110536590 cul2 coding downstream 342263 25834973 ~ 25856195 (+)
LOC110535542 LOC106578541 coding downstream 366135 25858845 ~ 26401631 (+)
LOC110536591 LOC106578544 coding downstream 1125438 26618148 ~ 26700276 (+)
LOC118936350 NA coding downstream 1220885 26713595 ~ 26751558 (+)
G959183 NA non-coding upstream 17808 25474333 ~ 25474569 (+)
G959156 NA non-coding upstream 36976 25455172 ~ 25455401 (+)
G959150 NA non-coding upstream 41577 25450423 ~ 25450800 (+)
G959092 NA non-coding upstream 90346 25401803 ~ 25402031 (+)
G959056 NA non-coding upstream 118575 25372900 ~ 25373802 (+)
G959371 NA non-coding downstream 131721 25624431 ~ 25624677 (+)
G959401 NA non-coding downstream 152839 25645549 ~ 25645782 (+)
G959454 NA non-coding downstream 191339 25684049 ~ 25684272 (+)
G959463 NA non-coding downstream 196054 25688764 ~ 25688988 (+)
G959464 NA non-coding downstream 196626 25689336 ~ 25689703 (+)
G958300 idi1 other upstream 696641 24794600 ~ 24795736 (+)
G957942 NA other upstream 890724 24600471 ~ 24601653 (+)
G956797 NA other upstream 1715532 23775772 ~ 23776845 (+)
G956728 LOC106613263 other upstream 1826447 23665288 ~ 23665930 (+)
tlcd4a LOC106570700 other upstream 2751130 22712577 ~ 22741263 (+)
G960696 LOC106583976 other downstream 1220915 26713625 ~ 26797294 (+)
G960816 armc4 other downstream 1435966 26928676 ~ 26929027 (+)
bambia LOC106578551 other downstream 1916292 27409002 ~ 27412913 (+)
mtpap LOC106578552 other downstream 2270278 27739381 ~ 27765414 (+)
G961864 NA other downstream 2336036 27828746 ~ 27829177 (+)

Expression


Co-expression Network