G959463


Basic Information

Item Value
gene id G959463
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 25688764 ~ 25688988 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1093726
gtccagatgggatagggtagtgtgcattgtgatggtgattgcatcatctgtggacctgttgggacggtatgcaaactgaagtgggtctagggtggctggtaaggtggaggtgatgtgatccatgactagtctctcaaagcacttcatgatgacagaagtgagtgctacgggcgatAGTTATTTACGTAGTTCAGTTCTTTGCCTTctttggtacaggaacaatgg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1093726 True 225 lncRNA 0.48 1 25688764 25688988

Neighbor

gene id symbol gene type direction distance location
pfkpa LOC106578535 coding upstream 466099 25194453 ~ 25222665 (+)
LOC110535530 LOC106578529 coding upstream 861742 24797246 ~ 24827022 (+)
LOC118937338 NA coding upstream 942082 24732370 ~ 24746682 (+)
rmdn1 rmdn1 coding upstream 1089546 24591123 ~ 24599218 (+)
cngb3.1 LOC106578566 coding upstream 1121770 24533079 ~ 24566994 (+)
fzd8a LOC106578536 coding downstream 39073 25728061 ~ 25730806 (+)
LOC110536590 cul2 coding downstream 145985 25834973 ~ 25856195 (+)
LOC110535542 LOC106578541 coding downstream 169857 25858845 ~ 26401631 (+)
LOC110536591 LOC106578544 coding downstream 929160 26618148 ~ 26700276 (+)
LOC118936350 NA coding downstream 1024607 26713595 ~ 26751558 (+)
G959454 NA non-coding upstream 4492 25684049 ~ 25684272 (+)
G959401 NA non-coding upstream 42982 25645549 ~ 25645782 (+)
G959371 NA non-coding upstream 64087 25624431 ~ 25624677 (+)
G959212 NA non-coding upstream 196054 25492377 ~ 25492710 (+)
G959183 NA non-coding upstream 214195 25474333 ~ 25474569 (+)
G959464 NA non-coding downstream 348 25689336 ~ 25689703 (+)
G959510 NA non-coding downstream 80067 25769055 ~ 25769839 (+)
G959637 NA non-coding downstream 369165 26058153 ~ 26072686 (+)
G959659 NA non-coding downstream 408062 26097050 ~ 26154913 (+)
G958300 idi1 other upstream 893028 24794600 ~ 24795736 (+)
G957942 NA other upstream 1087111 24600471 ~ 24601653 (+)
G956797 NA other upstream 1911919 23775772 ~ 23776845 (+)
G956728 LOC106613263 other upstream 2022834 23665288 ~ 23665930 (+)
tlcd4a LOC106570700 other upstream 2947517 22712577 ~ 22741263 (+)
G960696 LOC106583976 other downstream 1024637 26713625 ~ 26797294 (+)
G960816 armc4 other downstream 1239688 26928676 ~ 26929027 (+)
bambia LOC106578551 other downstream 1720014 27409002 ~ 27412913 (+)
mtpap LOC106578552 other downstream 2074000 27739381 ~ 27765414 (+)
G961864 NA other downstream 2139758 27828746 ~ 27829177 (+)

Expression


Co-expression Network