Gene
RNA
| Item | Value |
|---|---|
| gene id | G959464 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 25689336 ~ 25689703 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1093727 | True | 368 | lncRNA | 0.45 | 1 | 25689336 | 25689703 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pfkpa | LOC106578535 | coding | upstream | 466671 | 25194453 ~ 25222665 (+) |
| LOC110535530 | LOC106578529 | coding | upstream | 862314 | 24797246 ~ 24827022 (+) |
| LOC118937338 | NA | coding | upstream | 942654 | 24732370 ~ 24746682 (+) |
| rmdn1 | rmdn1 | coding | upstream | 1090118 | 24591123 ~ 24599218 (+) |
| cngb3.1 | LOC106578566 | coding | upstream | 1122342 | 24533079 ~ 24566994 (+) |
| fzd8a | LOC106578536 | coding | downstream | 38358 | 25728061 ~ 25730806 (+) |
| LOC110536590 | cul2 | coding | downstream | 145270 | 25834973 ~ 25856195 (+) |
| LOC110535542 | LOC106578541 | coding | downstream | 169142 | 25858845 ~ 26401631 (+) |
| LOC110536591 | LOC106578544 | coding | downstream | 928445 | 26618148 ~ 26700276 (+) |
| LOC118936350 | NA | coding | downstream | 1023892 | 26713595 ~ 26751558 (+) |
| G959463 | NA | non-coding | upstream | 348 | 25688764 ~ 25688988 (+) |
| G959454 | NA | non-coding | upstream | 5064 | 25684049 ~ 25684272 (+) |
| G959401 | NA | non-coding | upstream | 43554 | 25645549 ~ 25645782 (+) |
| G959371 | NA | non-coding | upstream | 64659 | 25624431 ~ 25624677 (+) |
| G959212 | NA | non-coding | upstream | 196626 | 25492377 ~ 25492710 (+) |
| G959510 | NA | non-coding | downstream | 79352 | 25769055 ~ 25769839 (+) |
| G959637 | NA | non-coding | downstream | 368450 | 26058153 ~ 26072686 (+) |
| G959659 | NA | non-coding | downstream | 407347 | 26097050 ~ 26154913 (+) |
| G959852 | NA | non-coding | downstream | 751239 | 26440942 ~ 26441293 (+) |
| G958300 | idi1 | other | upstream | 893600 | 24794600 ~ 24795736 (+) |
| G957942 | NA | other | upstream | 1087683 | 24600471 ~ 24601653 (+) |
| G956797 | NA | other | upstream | 1912491 | 23775772 ~ 23776845 (+) |
| G956728 | LOC106613263 | other | upstream | 2023406 | 23665288 ~ 23665930 (+) |
| tlcd4a | LOC106570700 | other | upstream | 2948089 | 22712577 ~ 22741263 (+) |
| G960696 | LOC106583976 | other | downstream | 1023922 | 26713625 ~ 26797294 (+) |
| G960816 | armc4 | other | downstream | 1238973 | 26928676 ~ 26929027 (+) |
| bambia | LOC106578551 | other | downstream | 1719299 | 27409002 ~ 27412913 (+) |
| mtpap | LOC106578552 | other | downstream | 2073285 | 27739381 ~ 27765414 (+) |
| G961864 | NA | other | downstream | 2139043 | 27828746 ~ 27829177 (+) |
