Gene
RNA
| Item | Value |
|---|---|
| gene id | G960696 |
| gene name | LOC106583976 |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 26713625 ~ 26797294 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1095116 | False | 734 | TUCP | 0.50 | 6 | 26713625 | 26797294 |
| TU1095111 | True | 424 | TUCP | 0.44 | 2 | 26749420 | 26751554 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110536591 | LOC106578544 | coding | upstream | 13349 | 26618148 ~ 26700276 (+) |
| LOC110535542 | LOC106578541 | coding | upstream | 312690 | 25858845 ~ 26401631 (+) |
| LOC110536590 | cul2 | coding | upstream | 857430 | 25834973 ~ 25856195 (+) |
| fzd8a | LOC106578536 | coding | upstream | 982819 | 25728061 ~ 25730806 (+) |
| pfkpa | LOC106578535 | coding | upstream | 1490960 | 25194453 ~ 25222665 (+) |
| rab18a | LOC106578546 | coding | downstream | 14732 | 26812026 ~ 26823822 (+) |
| waca | LOC106590019 | coding | downstream | 560472 | 27357766 ~ 27401629 (+) |
| bambia | LOC106578551 | coding | downstream | 612259 | 27409002 ~ 27412913 (+) |
| LOC110536609 | NA | coding | downstream | 795832 | 27593126 ~ 27597600 (+) |
| mtpap | LOC106578552 | coding | downstream | 942087 | 27739381 ~ 27765414 (+) |
| G960690 | NA | non-coding | upstream | 11350 | 26702050 ~ 26702275 (+) |
| G960689 | NA | non-coding | upstream | 12444 | 26700952 ~ 26701181 (+) |
| G960633 | NA | non-coding | upstream | 23420 | 26657725 ~ 26690205 (+) |
| G960486 | NA | non-coding | upstream | 198404 | 26514996 ~ 26515221 (+) |
| G959852 | NA | non-coding | upstream | 272332 | 26440942 ~ 26441293 (+) |
| G960776 | NA | non-coding | downstream | 60953 | 26858247 ~ 26858448 (+) |
| G960778 | NA | non-coding | downstream | 63313 | 26860607 ~ 26860822 (+) |
| G960780 | NA | non-coding | downstream | 64471 | 26861765 ~ 26862343 (+) |
| G960781 | NA | non-coding | downstream | 66044 | 26863338 ~ 26863564 (+) |
| G960783 | NA | non-coding | downstream | 70071 | 26867365 ~ 26867597 (+) |
| G958300 | idi1 | other | upstream | 1917889 | 24794600 ~ 24795736 (+) |
| G957942 | NA | other | upstream | 2111972 | 24600471 ~ 24601653 (+) |
| G956797 | NA | other | upstream | 2936780 | 23775772 ~ 23776845 (+) |
| G956728 | LOC106613263 | other | upstream | 3047695 | 23665288 ~ 23665930 (+) |
| tlcd4a | LOC106570700 | other | upstream | 3972378 | 22712577 ~ 22741263 (+) |
| G960816 | armc4 | other | downstream | 131382 | 26928676 ~ 26929027 (+) |
| G961864 | NA | other | downstream | 1031452 | 27828746 ~ 27829177 (+) |
| G961984 | NA | other | downstream | 1099872 | 27897166 ~ 27941575 (+) |
