G960735


Basic Information

Item Value
gene id G960735
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 26769365 ~ 26770184 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1095159
CCTTTTACATGCTCCTTTTACATGCTCCTTTTACATTTTACATGCTCCTTTTACATTTGACATGCTCCTTTTACATGCTCCTTTTACATTTGACATGCTCCTTTTACATGCTCCTTTTACATTTGACATGCTCCTTTTACATGCTCCTTTTACATTTTACAGGGTCCTTTTACATGCTCCTTTTACATTTGACATGCTCCTTTTACATGCTCCTTTTACATTTTACATgctccttttacat

Function

NR:

description
PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1095159 True 241 lncRNA 0.35 2 26769365 26770184

Neighbor

gene id symbol gene type direction distance location
LOC118936350 NA coding upstream 17807 26713595 ~ 26751558 (+)
LOC110536591 LOC106578544 coding upstream 69089 26618148 ~ 26700276 (+)
LOC110535542 LOC106578541 coding upstream 368430 25858845 ~ 26401631 (+)
LOC110536590 cul2 coding upstream 913170 25834973 ~ 25856195 (+)
fzd8a LOC106578536 coding upstream 1038559 25728061 ~ 25730806 (+)
rab18a LOC106578546 coding downstream 41842 26812026 ~ 26823822 (+)
waca LOC106590019 coding downstream 587582 27357766 ~ 27401629 (+)
bambia LOC106578551 coding downstream 639369 27409002 ~ 27412913 (+)
LOC110536609 NA coding downstream 822942 27593126 ~ 27597600 (+)
mtpap LOC106578552 coding downstream 969197 27739381 ~ 27765414 (+)
G960728 NA non-coding upstream 21434 26747039 ~ 26747931 (+)
G960690 NA non-coding upstream 67090 26702050 ~ 26702275 (+)
G960689 NA non-coding upstream 68184 26700952 ~ 26701181 (+)
G960633 NA non-coding upstream 79160 26657725 ~ 26690205 (+)
G960486 NA non-coding upstream 254144 26514996 ~ 26515221 (+)
G960776 NA non-coding downstream 88063 26858247 ~ 26858448 (+)
G960778 NA non-coding downstream 90423 26860607 ~ 26860822 (+)
G960780 NA non-coding downstream 91581 26861765 ~ 26862343 (+)
G960781 NA non-coding downstream 93154 26863338 ~ 26863564 (+)
G960783 NA non-coding downstream 97181 26867365 ~ 26867597 (+)
G958300 idi1 other upstream 1973629 24794600 ~ 24795736 (+)
G957942 NA other upstream 2167712 24600471 ~ 24601653 (+)
G956797 NA other upstream 2992520 23775772 ~ 23776845 (+)
G956728 LOC106613263 other upstream 3103435 23665288 ~ 23665930 (+)
tlcd4a LOC106570700 other upstream 4028118 22712577 ~ 22741263 (+)
G960816 armc4 other downstream 158492 26928676 ~ 26929027 (+)
G961864 NA other downstream 1058562 27828746 ~ 27829177 (+)
G961984 NA other downstream 1126982 27897166 ~ 27941575 (+)

Expression


Co-expression Network