G960778


Basic Information

Item Value
gene id G960778
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 26860607 ~ 26860822 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1095203
GTCAATAAATCATAGTGGaacctttatttattttgtattttcttttggGGCTTTTTTCTCCTGCTTTGCTAAGGAACCGAAAGTCATGCAGTCTACTTTGCTGCTACCTTTCTGTTATACTGAAGTGATGGTTTCAAGTCCAAAAACACTTGCTTACTTAACATCATGGTGGGCAATAGAGGAGGTTGAACACAGTGAGAAAACGTGAAACAAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1095203 True 216 lncRNA 0.38 1 26860607 26860822

Neighbor

gene id symbol gene type direction distance location
rab18a LOC106578546 coding upstream 36785 26812026 ~ 26823822 (+)
LOC110535543 LOC106590025 coding upstream 50643 26760317 ~ 26809964 (+)
LOC118936350 NA coding upstream 109049 26713595 ~ 26751558 (+)
LOC110536591 LOC106578544 coding upstream 160331 26618148 ~ 26700276 (+)
LOC110535542 LOC106578541 coding upstream 459672 25858845 ~ 26401631 (+)
waca LOC106590019 coding downstream 496944 27357766 ~ 27401629 (+)
bambia LOC106578551 coding downstream 548731 27409002 ~ 27412913 (+)
LOC110536609 NA coding downstream 732304 27593126 ~ 27597600 (+)
mtpap LOC106578552 coding downstream 878559 27739381 ~ 27765414 (+)
jcada LOC106578555 coding downstream 949227 27810049 ~ 27845341 (+)
G960776 NA non-coding upstream 2159 26858247 ~ 26858448 (+)
G960735 NA non-coding upstream 90423 26769365 ~ 26770184 (+)
G960728 NA non-coding upstream 112676 26747039 ~ 26747931 (+)
G960690 NA non-coding upstream 158332 26702050 ~ 26702275 (+)
G960689 NA non-coding upstream 159426 26700952 ~ 26701181 (+)
G960780 NA non-coding downstream 943 26861765 ~ 26862343 (+)
G960781 NA non-coding downstream 2516 26863338 ~ 26863564 (+)
G960783 NA non-coding downstream 6543 26867365 ~ 26867597 (+)
G960784 NA non-coding downstream 7575 26868397 ~ 26868673 (+)
G960787 LOC106578547 non-coding downstream 12188 26873010 ~ 26873337 (+)
G960696 LOC106583976 other upstream 63313 26713625 ~ 26797294 (+)
G958300 idi1 other upstream 2064871 24794600 ~ 24795736 (+)
G957942 NA other upstream 2258954 24600471 ~ 24601653 (+)
G956797 NA other upstream 3083762 23775772 ~ 23776845 (+)
G956728 LOC106613263 other upstream 3194677 23665288 ~ 23665930 (+)
G960816 armc4 other downstream 67854 26928676 ~ 26929027 (+)
G961864 NA other downstream 967924 27828746 ~ 27829177 (+)
G961984 NA other downstream 1036344 27897166 ~ 27941575 (+)

Expression


Co-expression Network