G960781


Basic Information

Item Value
gene id G960781
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 26863338 ~ 26863564 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1095206
GGTAAACATAGAGGAACCATTGTTTGGTGCTAAATACTTTTTTAATGGTTCTTTATAGCATACAGGTTCATTTAGAACCTTATGAGGATGATTTTTTATAGAACCTTCTAAAAAAGGTTccatttttcacaaaaaaaaggGTTACATTATGGTTACAAGCCAAATAAACATTATTTGGCACAATTGAGAACCATTTGTTTTTTAatgtgtagtgcactatataggga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1095206 True 227 lncRNA 0.30 1 26863338 26863564

Neighbor

gene id symbol gene type direction distance location
rab18a LOC106578546 coding upstream 39516 26812026 ~ 26823822 (+)
LOC110535543 LOC106590025 coding upstream 53374 26760317 ~ 26809964 (+)
LOC118936350 NA coding upstream 111780 26713595 ~ 26751558 (+)
LOC110536591 LOC106578544 coding upstream 163062 26618148 ~ 26700276 (+)
LOC110535542 LOC106578541 coding upstream 462403 25858845 ~ 26401631 (+)
waca LOC106590019 coding downstream 494202 27357766 ~ 27401629 (+)
bambia LOC106578551 coding downstream 545989 27409002 ~ 27412913 (+)
LOC110536609 NA coding downstream 729562 27593126 ~ 27597600 (+)
mtpap LOC106578552 coding downstream 875817 27739381 ~ 27765414 (+)
jcada LOC106578555 coding downstream 946485 27810049 ~ 27845341 (+)
G960780 NA non-coding upstream 995 26861765 ~ 26862343 (+)
G960778 NA non-coding upstream 2516 26860607 ~ 26860822 (+)
G960776 NA non-coding upstream 4890 26858247 ~ 26858448 (+)
G960735 NA non-coding upstream 93154 26769365 ~ 26770184 (+)
G960728 NA non-coding upstream 115407 26747039 ~ 26747931 (+)
G960783 NA non-coding downstream 3801 26867365 ~ 26867597 (+)
G960784 NA non-coding downstream 4833 26868397 ~ 26868673 (+)
G960787 LOC106578547 non-coding downstream 9446 26873010 ~ 26873337 (+)
G960800 NA non-coding downstream 35393 26898957 ~ 26899796 (+)
G960818 NA non-coding downstream 67118 26930682 ~ 26930885 (+)
G960696 LOC106583976 other upstream 66044 26713625 ~ 26797294 (+)
G958300 idi1 other upstream 2067602 24794600 ~ 24795736 (+)
G957942 NA other upstream 2261685 24600471 ~ 24601653 (+)
G956797 NA other upstream 3086493 23775772 ~ 23776845 (+)
G956728 LOC106613263 other upstream 3197408 23665288 ~ 23665930 (+)
G960816 armc4 other downstream 65112 26928676 ~ 26929027 (+)
G961864 NA other downstream 965182 27828746 ~ 27829177 (+)
G961984 NA other downstream 1033602 27897166 ~ 27941575 (+)

Expression


Co-expression Network