G960783


Basic Information

Item Value
gene id G960783
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 26867365 ~ 26867597 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1095208
AAACCTCTATGAGTCCCCGGGGTCCTGTCAAACACTACTGTTTTCATTTAACATATTTCGTCATCGTTAAATGTAACAAGTCACTTTAATGCTATAAAATACAGGTGAGCTTCAATCTTAACGCGTTGTGTGTCCTGGAAACGTCTTGAGCAACCTATCTGTCTGAGAAAATGGGGCGAATGGAAAAAGTGTGTTCCTCTCGAAATTACTGAGACGTTTTGGCCCTCTGAAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1095208 True 233 lncRNA 0.41 1 26867365 26867597

Neighbor

gene id symbol gene type direction distance location
rab18a LOC106578546 coding upstream 43543 26812026 ~ 26823822 (+)
LOC110535543 LOC106590025 coding upstream 57401 26760317 ~ 26809964 (+)
LOC118936350 NA coding upstream 115807 26713595 ~ 26751558 (+)
LOC110536591 LOC106578544 coding upstream 167089 26618148 ~ 26700276 (+)
LOC110535542 LOC106578541 coding upstream 466430 25858845 ~ 26401631 (+)
waca LOC106590019 coding downstream 490169 27357766 ~ 27401629 (+)
bambia LOC106578551 coding downstream 541956 27409002 ~ 27412913 (+)
LOC110536609 NA coding downstream 725529 27593126 ~ 27597600 (+)
mtpap LOC106578552 coding downstream 871784 27739381 ~ 27765414 (+)
jcada LOC106578555 coding downstream 942452 27810049 ~ 27845341 (+)
G960781 NA non-coding upstream 3801 26863338 ~ 26863564 (+)
G960780 NA non-coding upstream 5022 26861765 ~ 26862343 (+)
G960778 NA non-coding upstream 6543 26860607 ~ 26860822 (+)
G960776 NA non-coding upstream 8917 26858247 ~ 26858448 (+)
G960735 NA non-coding upstream 97181 26769365 ~ 26770184 (+)
G960784 NA non-coding downstream 800 26868397 ~ 26868673 (+)
G960787 LOC106578547 non-coding downstream 5413 26873010 ~ 26873337 (+)
G960800 NA non-coding downstream 31360 26898957 ~ 26899796 (+)
G960818 NA non-coding downstream 63085 26930682 ~ 26930885 (+)
G960822 NA non-coding downstream 68505 26936102 ~ 26936345 (+)
G960696 LOC106583976 other upstream 70071 26713625 ~ 26797294 (+)
G958300 idi1 other upstream 2071629 24794600 ~ 24795736 (+)
G957942 NA other upstream 2265712 24600471 ~ 24601653 (+)
G956797 NA other upstream 3090520 23775772 ~ 23776845 (+)
G956728 LOC106613263 other upstream 3201435 23665288 ~ 23665930 (+)
G960816 armc4 other downstream 61079 26928676 ~ 26929027 (+)
G961864 NA other downstream 961149 27828746 ~ 27829177 (+)
G961984 NA other downstream 1029569 27897166 ~ 27941575 (+)

Expression


Co-expression Network