Gene
RNA
| Item | Value |
|---|---|
| gene id | G960910 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 27177389 ~ 27180822 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1095356 | False | 226 | lncRNA | 0.41 | 3 | 27177389 | 27180822 |
| TU1095357 | True | 224 | lncRNA | 0.40 | 2 | 27180327 | 27180571 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| rab18a | LOC106578546 | coding | upstream | 353567 | 26812026 ~ 26823822 (+) |
| LOC110535543 | LOC106590025 | coding | upstream | 367425 | 26760317 ~ 26809964 (+) |
| LOC118936350 | NA | coding | upstream | 425831 | 26713595 ~ 26751558 (+) |
| LOC110536591 | LOC106578544 | coding | upstream | 477113 | 26618148 ~ 26700276 (+) |
| LOC110535542 | LOC106578541 | coding | upstream | 776454 | 25858845 ~ 26401631 (+) |
| waca | LOC106590019 | coding | downstream | 176944 | 27357766 ~ 27401629 (+) |
| bambia | LOC106578551 | coding | downstream | 228731 | 27409002 ~ 27412913 (+) |
| LOC110536609 | NA | coding | downstream | 412304 | 27593126 ~ 27597600 (+) |
| mtpap | LOC106578552 | coding | downstream | 558559 | 27739381 ~ 27765414 (+) |
| jcada | LOC106578555 | coding | downstream | 629227 | 27810049 ~ 27845341 (+) |
| G960892 | NA | non-coding | upstream | 27429 | 27149647 ~ 27149960 (+) |
| G960884 | NA | non-coding | upstream | 40275 | 27132257 ~ 27137114 (+) |
| G960842 | NA | non-coding | upstream | 114870 | 26998012 ~ 27062519 (+) |
| G960837 | armc4 | non-coding | upstream | 221917 | 26955249 ~ 26955472 (+) |
| G960831 | NA | non-coding | upstream | 227244 | 26949934 ~ 26950145 (+) |
| G960912 | NA | non-coding | downstream | 2418 | 27183240 ~ 27183895 (+) |
| G961345 | NA | non-coding | downstream | 176688 | 27357510 ~ 27357720 (+) |
| G961357 | NA | non-coding | downstream | 225173 | 27405995 ~ 27406206 (+) |
| G961364 | NA | non-coding | downstream | 240096 | 27420918 ~ 27421124 (+) |
| G960816 | armc4 | other | upstream | 248362 | 26928676 ~ 26929027 (+) |
| G960696 | LOC106583976 | other | upstream | 380095 | 26713625 ~ 26797294 (+) |
| G958300 | idi1 | other | upstream | 2381653 | 24794600 ~ 24795736 (+) |
| G957942 | NA | other | upstream | 2575736 | 24600471 ~ 24601653 (+) |
| G956797 | NA | other | upstream | 3400544 | 23775772 ~ 23776845 (+) |
| G961864 | NA | other | downstream | 647924 | 27828746 ~ 27829177 (+) |
| G961984 | NA | other | downstream | 716344 | 27897166 ~ 27941575 (+) |
| LOC110535556 | LOC106578558 | other | downstream | 951799 | 28132122 ~ 28249912 (+) |
