G960912


Basic Information

Item Value
gene id G960912
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 27183240 ~ 27183895 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1095360
agtagtagtagtagtagtagtagtagtagtagtagtagtagaagcagtagttgtagtttgggctatagtagaagtagtagtagtagcagtagttgtagtttgggctatagtagtagtagtagtagtagtagaagcagtagttgtagtttgggctatagtagtagtagtagcagtagttgtagtttgggctatagtagtagtagtagtagtagtagtagtagtagtttgggctatagtagtagtagtagtagcagtagcagtagtttgggctatagtagaagtagaagtagtagtagtagtagtagtagtagcagtagtagtagtagtagtagtagtagaagcagtagttgtagtttgggctatagtagtagtagtagtagtagtagtagtagtagtagtttgggctatagtagtagtagtagtagcagtagcagtagtttgggctatagtagaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1095360 True 455 lncRNA 0.38 2 27183240 27183895

Neighbor

gene id symbol gene type direction distance location
rab18a LOC106578546 coding upstream 359418 26812026 ~ 26823822 (+)
LOC110535543 LOC106590025 coding upstream 373276 26760317 ~ 26809964 (+)
LOC118936350 NA coding upstream 431682 26713595 ~ 26751558 (+)
LOC110536591 LOC106578544 coding upstream 482964 26618148 ~ 26700276 (+)
LOC110535542 LOC106578541 coding upstream 782305 25858845 ~ 26401631 (+)
waca LOC106590019 coding downstream 173871 27357766 ~ 27401629 (+)
bambia LOC106578551 coding downstream 225658 27409002 ~ 27412913 (+)
LOC110536609 NA coding downstream 409231 27593126 ~ 27597600 (+)
mtpap LOC106578552 coding downstream 555486 27739381 ~ 27765414 (+)
jcada LOC106578555 coding downstream 626154 27810049 ~ 27845341 (+)
G960910 NA non-coding upstream 2418 27177389 ~ 27180822 (+)
G960892 NA non-coding upstream 33280 27149647 ~ 27149960 (+)
G960884 NA non-coding upstream 46126 27132257 ~ 27137114 (+)
G960842 NA non-coding upstream 120721 26998012 ~ 27062519 (+)
G960837 armc4 non-coding upstream 227768 26955249 ~ 26955472 (+)
G961345 NA non-coding downstream 173615 27357510 ~ 27357720 (+)
G961357 NA non-coding downstream 222100 27405995 ~ 27406206 (+)
G961364 NA non-coding downstream 237023 27420918 ~ 27421124 (+)
G961502 NA non-coding downstream 448271 27632166 ~ 27632484 (+)
G960816 armc4 other upstream 254213 26928676 ~ 26929027 (+)
G960696 LOC106583976 other upstream 385946 26713625 ~ 26797294 (+)
G958300 idi1 other upstream 2387504 24794600 ~ 24795736 (+)
G957942 NA other upstream 2581587 24600471 ~ 24601653 (+)
G956797 NA other upstream 3406395 23775772 ~ 23776845 (+)
G961864 NA other downstream 644851 27828746 ~ 27829177 (+)
G961984 NA other downstream 713271 27897166 ~ 27941575 (+)
LOC110535556 LOC106578558 other downstream 948726 28132122 ~ 28249912 (+)

Expression


Co-expression Network