G961345


Basic Information

Item Value
gene id G961345
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 27357510 ~ 27357720 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1095836
taACCATACAGTCCTCGTCATCCTTAGAAGGACAGTAGACAACATACTGTACAATAGGTCACAATATTTGTCAATTCACTTCCACAAATATCCACAATCGAAAAAGGGAGAATCTGTTTTTAAGTAGATACTCGAATTACTAGACATCAACTTCTTTGAAAGAGTGTATTTGTGACCAAAAGTGACAGAAGTACCAGTAGCTACTATATAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1095836 True 211 lncRNA 0.35 1 27357510 27357720

Neighbor

gene id symbol gene type direction distance location
rab18a LOC106578546 coding upstream 533688 26812026 ~ 26823822 (+)
LOC110535543 LOC106590025 coding upstream 547546 26760317 ~ 26809964 (+)
LOC118936350 NA coding upstream 605952 26713595 ~ 26751558 (+)
LOC110536591 LOC106578544 coding upstream 657234 26618148 ~ 26700276 (+)
LOC110535542 LOC106578541 coding upstream 956575 25858845 ~ 26401631 (+)
waca LOC106590019 coding downstream 46 27357766 ~ 27401629 (+)
bambia LOC106578551 coding downstream 51833 27409002 ~ 27412913 (+)
LOC110536609 NA coding downstream 235406 27593126 ~ 27597600 (+)
mtpap LOC106578552 coding downstream 381661 27739381 ~ 27765414 (+)
jcada LOC106578555 coding downstream 452329 27810049 ~ 27845341 (+)
G960911 NA non-coding upstream 173470 27179188 ~ 27184040 (+)
G960912 NA non-coding upstream 173615 27183240 ~ 27183895 (+)
G960910 NA non-coding upstream 176688 27177389 ~ 27180822 (+)
G960892 NA non-coding upstream 207550 27149647 ~ 27149960 (+)
G960884 NA non-coding upstream 220396 27132257 ~ 27137114 (+)
G961357 NA non-coding downstream 48275 27405995 ~ 27406206 (+)
G961364 NA non-coding downstream 63198 27420918 ~ 27421124 (+)
G961502 NA non-coding downstream 274446 27632166 ~ 27632484 (+)
G961514 NA non-coding downstream 292496 27650216 ~ 27650418 (+)
G960816 armc4 other upstream 428483 26928676 ~ 26929027 (+)
G960696 LOC106583976 other upstream 560216 26713625 ~ 26797294 (+)
G958300 idi1 other upstream 2561774 24794600 ~ 24795736 (+)
G957942 NA other upstream 2755857 24600471 ~ 24601653 (+)
G956797 NA other upstream 3580665 23775772 ~ 23776845 (+)
G961864 NA other downstream 471026 27828746 ~ 27829177 (+)
G961984 NA other downstream 539446 27897166 ~ 27941575 (+)
LOC110535556 LOC106578558 other downstream 774901 28132122 ~ 28249912 (+)

Expression


Co-expression Network