G961863


Basic Information

Item Value
gene id G961863
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 27828461 ~ 27828660 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1096388
cctttacacggatcagtcattctggtccctttgcagaaaaacagccccaaagcatgatgtttccacccccatgcttcacagtaggtatggtgttctttggatgcaactcagcattctttgtcctccaaacacgacgagtttagtttttattaaatgaccatatgacattctcccaatcttcttctggataatccaaatgc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1096388 True 200 lncRNA 0.43 1 27828461 27828660

Neighbor

gene id symbol gene type direction distance location
mtpap LOC106578552 coding upstream 64291 27739381 ~ 27765414 (+)
LOC110536609 NA coding upstream 230861 27593126 ~ 27597600 (+)
bambia LOC106578551 coding upstream 415548 27409002 ~ 27412913 (+)
waca LOC106590019 coding upstream 426832 27357766 ~ 27401629 (+)
rab18a LOC106578546 coding upstream 1004639 26812026 ~ 26823822 (+)
svila LOC106578556 coding downstream 38366 27867026 ~ 28011031 (+)
LOC110535556 LOC106578558 coding downstream 303462 28132122 ~ 28249912 (+)
LOC110536610 NA coding downstream 663002 28491651 ~ 28492829 (+)
LOC118937385 NA coding downstream 670450 28499110 ~ 28506016 (+)
LOC110535568 LOC106578592 coding downstream 3260204 31088864 ~ 31169983 (+)
G961769 NA non-coding upstream 112974 27715142 ~ 27715487 (+)
G961739 NA non-coding upstream 142931 27685290 ~ 27685530 (+)
G961514 NA non-coding upstream 178043 27650216 ~ 27650418 (+)
G961502 NA non-coding upstream 195977 27632166 ~ 27632484 (+)
G961364 NA non-coding upstream 407337 27420918 ~ 27421124 (+)
G961870 NA non-coding downstream 5450 27834110 ~ 27834331 (+)
G961942 NA non-coding downstream 23744 27852404 ~ 27852634 (+)
G961953 NA non-coding downstream 30698 27859358 ~ 27860622 (+)
G961958 NA non-coding downstream 34333 27862993 ~ 27863456 (+)
G962001 NA non-coding downstream 95865 27924525 ~ 27982293 (+)
G960816 armc4 other upstream 899434 26928676 ~ 26929027 (+)
G960696 LOC106583976 other upstream 1031167 26713625 ~ 26797294 (+)
G958300 idi1 other upstream 3032725 24794600 ~ 24795736 (+)
G961864 NA other downstream 86 27828746 ~ 27829177 (+)
G961984 NA other downstream 68506 27897166 ~ 27941575 (+)
G962100 NA other downstream 398868 28227528 ~ 28229401 (+)
G965838 NA other downstream 2990178 30818838 ~ 30821252 (+)

Expression


Co-expression Network