Gene
RNA
| Item | Value |
|---|---|
| gene id | G962152 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 28210368 ~ 28211512 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1096748 | True | 1088 | lncRNA | 0.47 | 2 | 28210368 | 28211512 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| svila | LOC106578556 | coding | upstream | 199337 | 27867026 ~ 28011031 (+) |
| jcada | LOC106578555 | coding | upstream | 365027 | 27810049 ~ 27845341 (+) |
| mtpap | LOC106578552 | coding | upstream | 446198 | 27739381 ~ 27765414 (+) |
| LOC110536609 | NA | coding | upstream | 612768 | 27593126 ~ 27597600 (+) |
| bambia | LOC106578551 | coding | upstream | 797455 | 27409002 ~ 27412913 (+) |
| LOC110536610 | NA | coding | downstream | 280150 | 28491651 ~ 28492829 (+) |
| LOC118937385 | NA | coding | downstream | 287598 | 28499110 ~ 28506016 (+) |
| LOC110535568 | LOC106578592 | coding | downstream | 2877352 | 31088864 ~ 31169983 (+) |
| LOC110535570 | LOC106578590 | coding | downstream | 3542357 | 31753869 ~ 31790306 (+) |
| LOC110535575 | LOC105028291 | coding | downstream | 4139170 | 32350682 ~ 32354712 (+) |
| G962051 | NA | non-coding | upstream | 140349 | 28057088 ~ 28070019 (+) |
| G962043 | LOC106578557 | non-coding | upstream | 157121 | 28042644 ~ 28053247 (+) |
| G962001 | NA | non-coding | upstream | 228075 | 27924525 ~ 27982293 (+) |
| G961958 | NA | non-coding | upstream | 346912 | 27862993 ~ 27863456 (+) |
| G961953 | NA | non-coding | upstream | 349746 | 27859358 ~ 27860622 (+) |
| G962159 | NA | non-coding | downstream | 20751 | 28232263 ~ 28232466 (+) |
| G962163 | NA | non-coding | downstream | 23777 | 28235289 ~ 28235532 (+) |
| G962166 | NA | non-coding | downstream | 27003 | 28238515 ~ 28238743 (+) |
| G962169 | NA | non-coding | downstream | 30726 | 28242238 ~ 28242464 (+) |
| G962171 | NA | non-coding | downstream | 34104 | 28245616 ~ 28245818 (+) |
| G961984 | NA | other | upstream | 268793 | 27897166 ~ 27941575 (+) |
| G961864 | NA | other | upstream | 381191 | 27828746 ~ 27829177 (+) |
| G960816 | armc4 | other | upstream | 1281341 | 26928676 ~ 26929027 (+) |
| G962100 | NA | other | downstream | 16016 | 28227528 ~ 28229401 (+) |
| G965838 | NA | other | downstream | 2607326 | 30818838 ~ 30821252 (+) |
| LOC110536614 | LOC106578612 | other | downstream | 5172531 | 33383589 ~ 33386375 (+) |
| LOC110535592 | lmbr1 | other | downstream | 5246849 | 33411705 ~ 33473890 (+) |
| G969455 | LOC106578609 | other | downstream | 5391535 | 33603047 ~ 33603674 (+) |
