G962159


Basic Information

Item Value
gene id G962159
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 28232263 ~ 28232466 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1096755
aaaggctagatgtagagagagagaaaaggaaaggctaaacagagagagagagaaatggaaagtgtggatgagagagagacagatggacagggatggagagagagagggatggtgaaaAAGAGATGAAGATAGAGAGGGATAGTGAAAAAGAGATGAAgatagagagggacggagagagagaaatccTTCTACCCAGTGTCTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1096755 True 204 lncRNA 0.44 1 28232263 28232466

Neighbor

gene id symbol gene type direction distance location
svila LOC106578556 coding upstream 221232 27867026 ~ 28011031 (+)
jcada LOC106578555 coding upstream 386922 27810049 ~ 27845341 (+)
mtpap LOC106578552 coding upstream 468093 27739381 ~ 27765414 (+)
LOC110536609 NA coding upstream 634663 27593126 ~ 27597600 (+)
bambia LOC106578551 coding upstream 819350 27409002 ~ 27412913 (+)
LOC110536610 NA coding downstream 259196 28491651 ~ 28492829 (+)
LOC118937385 NA coding downstream 266644 28499110 ~ 28506016 (+)
LOC110535568 LOC106578592 coding downstream 2856398 31088864 ~ 31169983 (+)
LOC110535570 LOC106578590 coding downstream 3521403 31753869 ~ 31790306 (+)
LOC110535575 LOC105028291 coding downstream 4118216 32350682 ~ 32354712 (+)
G962152 NA non-coding upstream 20751 28210368 ~ 28211512 (+)
G962051 NA non-coding upstream 162244 28057088 ~ 28070019 (+)
G962043 LOC106578557 non-coding upstream 179016 28042644 ~ 28053247 (+)
G962001 NA non-coding upstream 249970 27924525 ~ 27982293 (+)
G961958 NA non-coding upstream 368807 27862993 ~ 27863456 (+)
G962163 NA non-coding downstream 2823 28235289 ~ 28235532 (+)
G962166 NA non-coding downstream 6049 28238515 ~ 28238743 (+)
G962169 NA non-coding downstream 9772 28242238 ~ 28242464 (+)
G962171 NA non-coding downstream 13150 28245616 ~ 28245818 (+)
G962176 NA non-coding downstream 19131 28251597 ~ 28252435 (+)
G962100 NA other upstream 2862 28227528 ~ 28229401 (+)
G961984 NA other upstream 290688 27897166 ~ 27941575 (+)
G961864 NA other upstream 403086 27828746 ~ 27829177 (+)
G965838 NA other downstream 2586372 30818838 ~ 30821252 (+)
LOC110536614 LOC106578612 other downstream 5151577 33383589 ~ 33386375 (+)
LOC110535592 lmbr1 other downstream 5225895 33411705 ~ 33473890 (+)
G969455 LOC106578609 other downstream 5370581 33603047 ~ 33603674 (+)
G969456 LOC106578609 other downstream 5372047 33604513 ~ 33604810 (+)

Expression


Co-expression Network