G962163


Basic Information

Item Value
gene id G962163
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 28235289 ~ 28235532 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1096759
caggttttcatcaaggatctttctgaaCTTTGCTCAGTTCGTCTtctccttgatcctgactagtctcccagtctctgccgctgaaaaacatcccaacaacatgatgatgccaccaccatgcttcacctctggacgtgatgcttggcattcagcccaaagagttcaatcttggtttcatcagaccagagaatcttgtttctcatggtctgagagtctttaggtgccatttggcaaactccaagtg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1096759 True 244 lncRNA 0.46 1 28235289 28235532

Neighbor

gene id symbol gene type direction distance location
svila LOC106578556 coding upstream 224258 27867026 ~ 28011031 (+)
jcada LOC106578555 coding upstream 389948 27810049 ~ 27845341 (+)
mtpap LOC106578552 coding upstream 471119 27739381 ~ 27765414 (+)
LOC110536609 NA coding upstream 637689 27593126 ~ 27597600 (+)
bambia LOC106578551 coding upstream 822376 27409002 ~ 27412913 (+)
LOC110536610 NA coding downstream 256130 28491651 ~ 28492829 (+)
LOC118937385 NA coding downstream 263578 28499110 ~ 28506016 (+)
LOC110535568 LOC106578592 coding downstream 2853332 31088864 ~ 31169983 (+)
LOC110535570 LOC106578590 coding downstream 3518337 31753869 ~ 31790306 (+)
LOC110535575 LOC105028291 coding downstream 4115150 32350682 ~ 32354712 (+)
G962159 NA non-coding upstream 2823 28232263 ~ 28232466 (+)
G962152 NA non-coding upstream 23777 28210368 ~ 28211512 (+)
G962051 NA non-coding upstream 165270 28057088 ~ 28070019 (+)
G962043 LOC106578557 non-coding upstream 182042 28042644 ~ 28053247 (+)
G962001 NA non-coding upstream 252996 27924525 ~ 27982293 (+)
G962166 NA non-coding downstream 2983 28238515 ~ 28238743 (+)
G962169 NA non-coding downstream 6706 28242238 ~ 28242464 (+)
G962171 NA non-coding downstream 10084 28245616 ~ 28245818 (+)
G962176 NA non-coding downstream 16065 28251597 ~ 28252435 (+)
G962175 NA non-coding downstream 16989 28252521 ~ 28252851 (+)
G962100 NA other upstream 5888 28227528 ~ 28229401 (+)
G961984 NA other upstream 293714 27897166 ~ 27941575 (+)
G961864 NA other upstream 406112 27828746 ~ 27829177 (+)
G965838 NA other downstream 2583306 30818838 ~ 30821252 (+)
LOC110536614 LOC106578612 other downstream 5148511 33383589 ~ 33386375 (+)
LOC110535592 lmbr1 other downstream 5222829 33411705 ~ 33473890 (+)
G969455 LOC106578609 other downstream 5367515 33603047 ~ 33603674 (+)
G969456 LOC106578609 other downstream 5368981 33604513 ~ 33604810 (+)

Expression


Co-expression Network