XLOC_028705 (dnajb9b)


Basic Information

Item Value
gene id XLOC_028705
gene name dnajb9b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 17821390 ~ 17823424 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00055652
GAAAAGCGATCAGCTGTTCTGTGCTTGATGCAACTTTGGGACTGAAAGCATCGGACATGGCTACAGCACAGTCAGTGTTCACAGTGGCTGTGAGCATTCTGCTCATCTCAGAGCTCATCCTGGCTGAGAAAGACTACTACGAGATCCTGGGGGTTCCCAAAGATGCATCTGACCGGCAGATCAAAAAAGCCTTTCACAAACTAGCCATGCGCTTCCacccagacaaaaacaaaagccctgaCGCAGAAGCAAAGTTCAGAGAGATTGCTGAAGCCTACGAAACATTATCAGATGACAACCGGCGGAAGGAATATGATCAGACGAGAAGCCGTCCGTTCTCCGGAGGAGGCTCTGAGCACTTCCATCAACACTTTAACTTCAACTTTGAAGATGCATTCAGACACAGTCCTCACTCTCACAACCAAAGACATTTCCAGAGCCACTTTAAGGCCCATGAGGAAGCACGCAGCAGGCACAGGAGGCACTTCCAGAGCTCTTTCGGTGGAGACATGTTTGATGATGTGTTCCAAGACATGGAGAGGATGTTTTCTTTTAATGGACAACAGACTCGGACCCAAGGCTCCAGCAGGCAGCACTGCAGGACTGTCACACAGAGAAGAGGAAACATGGTTACTACATACACTGAATGCTCCTGAGCTCATGTGGAAACTTCTTCCTGTTGTCTTGACTGAAAcctgatgttttttttgtgtgtgtgttttggattAGTTCTGATGATCTATTATCAAATCGCACATTAATGGGAGAAACATCCTGAATCGGACTTCATGGGTACTTCTCCATccacaaacatatttataatgaaCATAAAGGCCATAAGAGAAGTTTTGATTAACTGAGCCATGAATTTTCAATTATTTCAAAAATGTCgttaataaattagttaataaatatacatttaaatgcatgtttaaaaacatcaaatacatatTTATCAAGTTTACTTGTGCATATACATAGATACTGTATCTTtacattgtaataaaataatgcaatgttATAAAACATCAAA
>TCONS_00055653
CATGGCTACAGCACAGTCAGTGTTCACAGTGGCTGTGAGCATTCTGCTCATCTCAGAGCTCATCCTGGCTGAGAAAGACTACTACGAGATCCTGGGGGTTCCCAAAGATGCATCTGACCGGCAGATCAAAAAAGCCTTTCACAAACTAGCCATGCGCTTCCacccagacaaaaacaaaagccctgaCGCAGAAGCAAAGTTCAGAGAGATTGCTGAAGCCTACGAAACATTATCAGATGACAACCGGCGGAAGGAATATGATCAGACGAGAAGCCGTCCGTTCTCCGGAGGAGGCTCTGAGCACTTCCATCAACACTTTAACTTCAACTTTGAAGATGCATTCAGACACAGTCCTCACTCTCACAACCAAAGACATTTCCAGAGCCACTTTAAGGCCCATGAGGAAGCACGCAGCAGGCACAGGAGGCACTTCCAGAGCTCTTTCGGTGGAGACATGTTTGATGATGTGTTCCAAGACATGGAGAGGATGTTTTCTTTTAATGGACAACAGACTCGGACCCAAGGCTCCAGCAGGCAGCACTGCAGGACTGTCACACAGAGAAGAGGAAACATGGTTACTACATACACTGAATGCTCCTGAGCTCATGTGGAAACTTCTTCCTGTTGTCTTG

Function

symbol description
dnajb9b Is expressed in hatching gland; polster; and yolk syncytial layer. Orthologous to human DNAJB9 (DnaJ heat shock protein family (Hsp40) member B9).

GO:

id name namespace
GO:0005575 cellular_component cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-050522-76 Is expressed in hatching gland; polster; and yolk syncytial layer. Orthologous to human DNAJB9 (DnaJ heat shock protein family (Hsp40) member B9).

Ensembl:

ensembl_id ENSDARG00000016886

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00055652 False 1033 mRNA 0.42 3 17821390 17823424
TCONS_00055653 True 632 mRNA 0.49 2 17821736 17822447

Neighbor

gene id symbol gene type direction distance location
XLOC_028704 spic coding downstream 9259 17807837 ~ 17812131 (-)
XLOC_028703 spi2 coding downstream 16262 17801328 ~ 17805128 (-)
XLOC_028701 mybpc1 coding downstream 28238 17726841 ~ 17793152 (-)
XLOC_028702 BX890572.1 coding downstream 83578 17736443 ~ 17737812 (-)
XLOC_028700 chpt1 coding downstream 96382 17707008 ~ 17725008 (-)
XLOC_028706 avpr2l coding upstream 12674 17836098 ~ 17838179 (-)
XLOC_028707 NA coding upstream 51647 17875071 ~ 17882930 (-)
XLOC_028708 anks1b coding upstream 63414 17886838 ~ 18202291 (-)
XLOC_028709 BX901882.1 coding upstream 365982 18189406 ~ 18189520 (-)
XLOC_028710 uhrf1bp1l coding upstream 384231 18207655 ~ 18281160 (-)
XLOC_028696 NA non-coding downstream 191946 17571295 ~ 17629444 (-)
XLOC_028690 NA non-coding downstream 605167 17113379 ~ 17216223 (-)
XLOC_028684 NA non-coding downstream 996834 16763705 ~ 16824556 (-)
XLOC_028674 NA non-coding downstream 1520148 16299656 ~ 16301242 (-)
XLOC_028719 dre-let-7b non-coding upstream 829724 18653148 ~ 18653241 (-)
XLOC_028720 dre-let-7a-3 non-coding upstream 830731 18654155 ~ 18654261 (-)
XLOC_028721 NA non-coding upstream 831258 18654682 ~ 18679692 (-)

Expression


Co-expression Network