Gene
RNA
| Item | Value |
|---|---|
| gene id | G962327 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 28477036 ~ 28478993 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1096963 | True | 851 | lncRNA | 0.39 | 2 | 28477036 | 28478993 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110535556 | LOC106578558 | coding | upstream | 227550 | 28132122 ~ 28249912 (+) |
| svila | LOC106578556 | coding | upstream | 466005 | 27867026 ~ 28011031 (+) |
| jcada | LOC106578555 | coding | upstream | 631695 | 27810049 ~ 27845341 (+) |
| mtpap | LOC106578552 | coding | upstream | 712866 | 27739381 ~ 27765414 (+) |
| LOC110536609 | NA | coding | upstream | 879436 | 27593126 ~ 27597600 (+) |
| LOC110536610 | NA | coding | downstream | 12669 | 28491651 ~ 28492829 (+) |
| LOC118937385 | NA | coding | downstream | 20117 | 28499110 ~ 28506016 (+) |
| LOC110535568 | LOC106578592 | coding | downstream | 2609871 | 31088864 ~ 31169983 (+) |
| LOC110535570 | LOC106578590 | coding | downstream | 3274876 | 31753869 ~ 31790306 (+) |
| LOC110535575 | LOC105028291 | coding | downstream | 3871689 | 32350682 ~ 32354712 (+) |
| G962324 | LOC108280341 | non-coding | upstream | 2645 | 28473783 ~ 28474391 (+) |
| G962318 | NA | non-coding | upstream | 15381 | 28460634 ~ 28461655 (+) |
| G962317 | NA | non-coding | upstream | 17971 | 28458673 ~ 28459065 (+) |
| G962316 | NA | non-coding | upstream | 19090 | 28457738 ~ 28457946 (+) |
| G962315 | LOC106578561 | non-coding | upstream | 19481 | 28457274 ~ 28457555 (+) |
| G962418 | NA | non-coding | downstream | 136915 | 28615908 ~ 28616493 (+) |
| G962981 | NA | non-coding | downstream | 242187 | 28721180 ~ 28722160 (+) |
| G963007 | NA | non-coding | downstream | 258353 | 28737346 ~ 28737567 (+) |
| G963044 | NA | non-coding | downstream | 283422 | 28762415 ~ 28762633 (+) |
| G962100 | NA | other | upstream | 247635 | 28227528 ~ 28229401 (+) |
| G961984 | NA | other | upstream | 535461 | 27897166 ~ 27941575 (+) |
| G961864 | NA | other | upstream | 647859 | 27828746 ~ 27829177 (+) |
| G965838 | NA | other | downstream | 2339845 | 30818838 ~ 30821252 (+) |
| LOC110536614 | LOC106578612 | other | downstream | 4905050 | 33383589 ~ 33386375 (+) |
| LOC110535592 | lmbr1 | other | downstream | 4979368 | 33411705 ~ 33473890 (+) |
| G969455 | LOC106578609 | other | downstream | 5124054 | 33603047 ~ 33603674 (+) |
| G969456 | LOC106578609 | other | downstream | 5125520 | 33604513 ~ 33604810 (+) |
