G962982


Basic Information

Item Value
gene id G962982
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 28721646 ~ 28722303 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1097678
gccgtatattcaatttaagcctactaaaaagtgtgtgccctcaggcctggtgGGAATCAAAAGGTATTcccctacctaagaatagtaaaacCCCCTTTACCTGCTCAAATAGCCacccaatcagcctgttaccaacccttagtgaCATTTTTTTGGGACCAGATACAATACTATTTTACAGTGAACAAATTGACAagagactttcagcacgcttatagggaaggacattcaataaGCACAGCacatacacaaatgactgatgattggctgagagaaattgatgataaaaagattgtgggggctgttttgttagacttcagagtggcttttgacattatcgatcatagtctgctgctggaaaaacatatgtgttatggctttacaccccctgctgtattgtggataaagagttacctgtccaacagaacacagagggtgttctttaatgaaagcctatccaacataatccaggtggAATCAGGATTTTCCCAGGGCTGCtttctaggccccttacttttttcaatctttactaacgacatgccactgactttgagtaaagccagtgtgtctatgtatttGGATGATtcaacattatacacgtcagctactacagcgactgaaatgactgcaacacttaacaaagagctgcagttagttt

Function

NR:

description
PREDICTED: RNA-directed DNA polymerase from mobile element jockey-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1097678 True 658 TUCP 0.41 1 28721646 28722303

Neighbor

gene id symbol gene type direction distance location
LOC110535562 LOC106578563 coding downstream 178093 28508814 ~ 28543553 (-)
LOC110535559 LOC106578561 coding downstream 233250 28427204 ~ 28488396 (-)
LOC110535558 LOC106578560 coding downstream 330255 28362793 ~ 28391391 (-)
LOC110535557 LOC106578559 coding downstream 359907 28266350 ~ 28361739 (-)
LOC110535555 LOC106578557 coding downstream 611229 28042644 ~ 28110417 (-)
LOC110535563 LOC106578564 coding upstream 212165 28934468 ~ 29311247 (-)
LOC110535564 LOC106578565 coding upstream 785851 29508154 ~ 29716858 (-)
LOC110535566 LOC106578577 coding upstream 1276018 29998321 ~ 30060960 (-)
drosha drosha coding upstream 2449078 31171381 ~ 31328624 (-)
LOC110535569 LOC106578596 coding upstream 2685663 31407966 ~ 31409385 (-)
G962952 NA non-coding downstream 38820 28682519 ~ 28682826 (-)
G962863 NA non-coding downstream 151618 28567251 ~ 28570028 (-)
G962829 NA non-coding downstream 183609 28516192 ~ 28538037 (-)
G962764 NA non-coding downstream 287749 28433352 ~ 28433897 (-)
G962991 NA non-coding upstream 4128 28726431 ~ 28726729 (-)
G962994 NA non-coding upstream 5887 28728190 ~ 28728409 (-)
G963003 NA non-coding upstream 13462 28735765 ~ 28736061 (-)
G963016 NA non-coding upstream 20287 28742590 ~ 28743477 (-)
G963022 NA non-coding upstream 25485 28747788 ~ 28748074 (-)
G961930 LOC106578555 other downstream 884878 27835966 ~ 27836768 (-)
G961041 LOC107713907 other downstream 1918820 26737174 ~ 26802826 (-)
G960344 LOC106578541 other downstream 2320095 26357045 ~ 26401551 (-)
LOC110535540 LOC106578540 other downstream 2898599 25818677 ~ 25833045 (-)
G959058 NA other downstream 3347348 25373845 ~ 25374298 (-)
G966663 LOC100194703 other upstream 2668733 31391036 ~ 31391344 (-)
G967535 NA other upstream 3328657 32050960 ~ 32053193 (-)
LOC110535581 LOC106578582 other upstream 3766893 32489195 ~ 32549643 (-)
G968868 NA other upstream 3944449 32666752 ~ 32667490 (-)
G970066 NA other upstream 5152511 33874814 ~ 33875272 (-)

Expression


Co-expression Network