G963007


Basic Information

Item Value
gene id G963007
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 28737346 ~ 28737567 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1097703
atgcaCCCCACTCTCAAGGACTGTGGGCTGCCGGCCAGAAGGCATCCCAAGCTgcgttctcagagcatgtgcagaccagctggatgGAGTGTTTAAAGACCTATTTAATCTcaccctatcccagtctgctgtccccacttccTTCAAGATgtacaccattgttcctgtaccaaagATTGCAAAGGTAACGGAACTAAATTACTTCACAACCATAGTACCCCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1097703 True 222 lncRNA 0.50 1 28737346 28737567

Neighbor

gene id symbol gene type direction distance location
LOC118937385 NA coding upstream 231330 28499110 ~ 28506016 (+)
LOC110536610 NA coding upstream 244522 28491651 ~ 28492829 (+)
LOC110535556 LOC106578558 coding upstream 487860 28132122 ~ 28249912 (+)
svila LOC106578556 coding upstream 726315 27867026 ~ 28011031 (+)
jcada LOC106578555 coding upstream 892005 27810049 ~ 27845341 (+)
LOC110535568 LOC106578592 coding downstream 2351297 31088864 ~ 31169983 (+)
LOC110535570 LOC106578590 coding downstream 3016302 31753869 ~ 31790306 (+)
LOC110535575 LOC105028291 coding downstream 3613115 32350682 ~ 32354712 (+)
LOC110535577 LOC106578587 coding downstream 3633894 32371461 ~ 32390805 (+)
LOC110535578 LOC106578586 coding downstream 3724858 32462425 ~ 32476477 (+)
G962981 NA non-coding upstream 15186 28721180 ~ 28722160 (+)
G962418 NA non-coding upstream 120853 28615908 ~ 28616493 (+)
G962327 NA non-coding upstream 258353 28477036 ~ 28478993 (+)
G962324 LOC108280341 non-coding upstream 262955 28473783 ~ 28474391 (+)
G963044 NA non-coding downstream 24848 28762415 ~ 28762633 (+)
G963056 NA non-coding downstream 35797 28773364 ~ 28773575 (+)
G963061 NA non-coding downstream 40685 28778252 ~ 28778641 (+)
G963071 NA non-coding downstream 51727 28789294 ~ 28805540 (+)
G963248 NA non-coding downstream 182642 28920209 ~ 28920505 (+)
G962100 NA other upstream 507945 28227528 ~ 28229401 (+)
G961984 NA other upstream 795771 27897166 ~ 27941575 (+)
G961864 NA other upstream 908169 27828746 ~ 27829177 (+)
mtpap LOC106578552 other upstream 971932 27739381 ~ 27765414 (+)
G965838 NA other downstream 2081271 30818838 ~ 30821252 (+)
LOC110536614 LOC106578612 other downstream 4646476 33383589 ~ 33386375 (+)
LOC110535592 lmbr1 other downstream 4720794 33411705 ~ 33473890 (+)
G969455 LOC106578609 other downstream 4865480 33603047 ~ 33603674 (+)
G969456 LOC106578609 other downstream 4866946 33604513 ~ 33604810 (+)

Expression


Co-expression Network