G963061


Basic Information

Item Value
gene id G963061
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 28778252 ~ 28778641 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1097760
cctatctacagggtccgtaagattttggacatgcgtcctcagggccgtggtcatcagtacctagtggattgggaggggtacggtcctgaggaaaggagttgggttccctctcgggacgtgctggaccgttcgctgatcgatgatttcctccgttgccaccaggtttcctcctcgagtgcgccaggaggcgctcggtgagtgggggggtactgtcatgtattgtcatattatgtcttgttcctgttctttctcttcactccgtctccctctgctggtcgtattaggttaccttctctccctctccttcccccagctgctcctcatcttctctaactacctcgttcacccttttcccacctgttccctttttccctctgattaggtctctat

Function

NR:

description
lipoxygenase homology domain-containing protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1097760 True 390 lncRNA 0.54 1 28778252 28778641

Neighbor

gene id symbol gene type direction distance location
LOC118937385 NA coding upstream 272236 28499110 ~ 28506016 (+)
LOC110536610 NA coding upstream 285428 28491651 ~ 28492829 (+)
LOC110535556 LOC106578558 coding upstream 528766 28132122 ~ 28249912 (+)
svila LOC106578556 coding upstream 767221 27867026 ~ 28011031 (+)
jcada LOC106578555 coding upstream 932911 27810049 ~ 27845341 (+)
LOC110535568 LOC106578592 coding downstream 2310223 31088864 ~ 31169983 (+)
LOC110535570 LOC106578590 coding downstream 2975228 31753869 ~ 31790306 (+)
LOC110535575 LOC105028291 coding downstream 3572041 32350682 ~ 32354712 (+)
LOC110535577 LOC106578587 coding downstream 3592820 32371461 ~ 32390805 (+)
LOC110535578 LOC106578586 coding downstream 3683784 32462425 ~ 32476477 (+)
G963056 NA non-coding upstream 4677 28773364 ~ 28773575 (+)
G963044 NA non-coding upstream 15619 28762415 ~ 28762633 (+)
G963007 NA non-coding upstream 40685 28737346 ~ 28737567 (+)
G962981 NA non-coding upstream 56092 28721180 ~ 28722160 (+)
G962418 NA non-coding upstream 161759 28615908 ~ 28616493 (+)
G963071 NA non-coding downstream 10653 28789294 ~ 28805540 (+)
G963248 NA non-coding downstream 141568 28920209 ~ 28920505 (+)
G963484 NA non-coding downstream 431432 29210073 ~ 29251481 (+)
G963527 NA non-coding downstream 493734 29272375 ~ 29280765 (+)
G963560 NA non-coding downstream 540519 29319160 ~ 29338476 (+)
G962100 NA other upstream 548851 28227528 ~ 28229401 (+)
G961984 NA other upstream 836677 27897166 ~ 27941575 (+)
G961864 NA other upstream 949075 27828746 ~ 27829177 (+)
mtpap LOC106578552 other upstream 1012838 27739381 ~ 27765414 (+)
G965838 NA other downstream 2040197 30818838 ~ 30821252 (+)
LOC110536614 LOC106578612 other downstream 4605402 33383589 ~ 33386375 (+)
LOC110535592 lmbr1 other downstream 4679720 33411705 ~ 33473890 (+)
G969455 LOC106578609 other downstream 4824406 33603047 ~ 33603674 (+)
G969456 LOC106578609 other downstream 4825872 33604513 ~ 33604810 (+)

Expression


Co-expression Network