G963248


Basic Information

Item Value
gene id G963248
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 28920209 ~ 28920505 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1097952
ggtaacatttagggagtcttgttttcagattagctttgttaaaatccccagctacaatgaatgcagcctccggataaatcgtttccagtttgcagagagttaaataaagttcgttcagagccatcgatgtgtctgcttggggggggatatatacggctgtgattataatcgaagagaattctcttggtagataatgcggtctacatttgattgtgaggaattctaaatcaggtgaacagaaggatttgagttcctgtatgtttctttcatcaaaccatgtcacgttggccatgaggc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1097952 True 297 lncRNA 0.41 1 28920209 28920505

Neighbor

gene id symbol gene type direction distance location
LOC118937385 NA coding upstream 414193 28499110 ~ 28506016 (+)
LOC110536610 NA coding upstream 427385 28491651 ~ 28492829 (+)
LOC110535556 LOC106578558 coding upstream 670723 28132122 ~ 28249912 (+)
svila LOC106578556 coding upstream 909178 27867026 ~ 28011031 (+)
jcada LOC106578555 coding upstream 1074868 27810049 ~ 27845341 (+)
LOC110535568 LOC106578592 coding downstream 2168359 31088864 ~ 31169983 (+)
LOC110535570 LOC106578590 coding downstream 2833364 31753869 ~ 31790306 (+)
LOC110535575 LOC105028291 coding downstream 3430177 32350682 ~ 32354712 (+)
LOC110535577 LOC106578587 coding downstream 3450956 32371461 ~ 32390805 (+)
LOC110535578 LOC106578586 coding downstream 3541920 32462425 ~ 32476477 (+)
G963071 NA non-coding upstream 114669 28789294 ~ 28805540 (+)
G963061 NA non-coding upstream 141568 28778252 ~ 28778641 (+)
G963056 NA non-coding upstream 146634 28773364 ~ 28773575 (+)
G963044 NA non-coding upstream 157576 28762415 ~ 28762633 (+)
G963007 NA non-coding upstream 182642 28737346 ~ 28737567 (+)
G963484 NA non-coding downstream 289568 29210073 ~ 29251481 (+)
G963527 NA non-coding downstream 351870 29272375 ~ 29280765 (+)
G963560 NA non-coding downstream 398655 29319160 ~ 29338476 (+)
G963576 NA non-coding downstream 419269 29339774 ~ 29379378 (+)
G963633 NA non-coding downstream 500576 29421081 ~ 29474194 (+)
G962100 NA other upstream 690808 28227528 ~ 28229401 (+)
G961984 NA other upstream 978634 27897166 ~ 27941575 (+)
G961864 NA other upstream 1091032 27828746 ~ 27829177 (+)
mtpap LOC106578552 other upstream 1154795 27739381 ~ 27765414 (+)
G965838 NA other downstream 1898333 30818838 ~ 30821252 (+)
LOC110536614 LOC106578612 other downstream 4463538 33383589 ~ 33386375 (+)
LOC110535592 lmbr1 other downstream 4537856 33411705 ~ 33473890 (+)
G969455 LOC106578609 other downstream 4682542 33603047 ~ 33603674 (+)
G969456 LOC106578609 other downstream 4684008 33604513 ~ 33604810 (+)

Expression


Co-expression Network