G963576


Basic Information

Item Value
gene id G963576
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 29339774 ~ 29379378 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1098293
tctcaagcttagccttttgtaaacaacactgtcatctcagattttcaaaatatgcttctcaaccataggaaaacaataatttgtgtaaaagtagctagctagagttagcatttcgcgttagcatttagcgttagcattagcgttagcatccagcacgcaacattaacaaaaacataaaagccttcaaataaaatcatttacctttgaagaacttctgatgttttcaatgaggatactctcagttagatagcagatgctcagtttttccaaaaagattccttgtgtattagaaagagctccgttttatacatcacatttggctaccaaaaaaaatccataaattcagtcctcaaaacgcaaacttttttccaaattaactccataatatcgactgaaaacatggcaaacgttgtttagaatcaatcatcaaggtgtttttcacatatctcttcattgatacatcgttcttggacacatgctttctcccctgaatcaaatggtaaagtagaagcagctggcaattgcgcaccgaattcgacgcaggacaccaggcggacacttggaaaatgtagtctcttatggtcaatcttccaatgatatgcctacaaatacgtcacaatgctgccgacatcttggggaaacggcagaaggtctaagcttattcctgtcgcattcacagccatataaggagacattagaaaacagagcttcagaaattctgctcatttcctggttgacgtatcatcttggtttcgcctgtagaatgagttctggggcacttacagacaaaatctttgcagattctgaaacttcagagtgttttctttccaaaactgtcagaatatgcatagtcgagca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1098293 True 858 lncRNA 0.38 2 29339774 29379378

Neighbor

gene id symbol gene type direction distance location
LOC118937385 NA coding upstream 833758 28499110 ~ 28506016 (+)
LOC110536610 NA coding upstream 846950 28491651 ~ 28492829 (+)
LOC110535556 LOC106578558 coding upstream 1090288 28132122 ~ 28249912 (+)
svila LOC106578556 coding upstream 1328743 27867026 ~ 28011031 (+)
jcada LOC106578555 coding upstream 1494433 27810049 ~ 27845341 (+)
LOC110535568 LOC106578592 coding downstream 1709486 31088864 ~ 31169983 (+)
LOC110535570 LOC106578590 coding downstream 2374491 31753869 ~ 31790306 (+)
LOC110535575 LOC105028291 coding downstream 2971304 32350682 ~ 32354712 (+)
LOC110535577 LOC106578587 coding downstream 2992083 32371461 ~ 32390805 (+)
LOC110535578 LOC106578586 coding downstream 3083047 32462425 ~ 32476477 (+)
G963560 NA non-coding upstream 1298 29319160 ~ 29338476 (+)
G963527 NA non-coding upstream 59009 29272375 ~ 29280765 (+)
G963484 NA non-coding upstream 88293 29210073 ~ 29251481 (+)
G963248 NA non-coding upstream 419269 28920209 ~ 28920505 (+)
G963071 NA non-coding upstream 534234 28789294 ~ 28805540 (+)
G963633 NA non-coding downstream 41703 29421081 ~ 29474194 (+)
G964048 NA non-coding downstream 96212 29475590 ~ 29475823 (+)
G964061 NA non-coding downstream 104366 29483744 ~ 29483948 (+)
G964072 NA non-coding downstream 109954 29489332 ~ 29489549 (+)
G964491 NA non-coding downstream 387853 29767231 ~ 29767510 (+)
G962100 NA other upstream 1110373 28227528 ~ 28229401 (+)
G961984 NA other upstream 1398199 27897166 ~ 27941575 (+)
G961864 NA other upstream 1510597 27828746 ~ 27829177 (+)
mtpap LOC106578552 other upstream 1574360 27739381 ~ 27765414 (+)
G965838 NA other downstream 1439460 30818838 ~ 30821252 (+)
LOC110536614 LOC106578612 other downstream 4004665 33383589 ~ 33386375 (+)
LOC110535592 lmbr1 other downstream 4078983 33411705 ~ 33473890 (+)
G969455 LOC106578609 other downstream 4223669 33603047 ~ 33603674 (+)
G969456 LOC106578609 other downstream 4225135 33604513 ~ 33604810 (+)

Expression


Co-expression Network