G964510


Basic Information

Item Value
gene id G964510
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 29779675 ~ 29779891 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1099264
ACGTATAGGGGACACAGGTAACAGGTGGAGCTTTTCCCTTTACAATGCCTTTACTGACATTTAGGTTCCAACTGACACCCTATTCATCAGAAGCACATGACATTTGATCATAAAGAGGTATTTACGTGTACTCTCTGTCTctgaaaaacaaaatgtttgatttgtttgccATCAATGTCATTTGAGAGTCAATGTTGAGAAGTAGGATATGATATAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1099264 True 217 lncRNA 0.38 1 29779675 29779891

Neighbor

gene id symbol gene type direction distance location
LOC118937385 NA coding upstream 1273659 28499110 ~ 28506016 (+)
LOC110536610 NA coding upstream 1286851 28491651 ~ 28492829 (+)
LOC110535556 LOC106578558 coding upstream 1530189 28132122 ~ 28249912 (+)
svila LOC106578556 coding upstream 1768644 27867026 ~ 28011031 (+)
jcada LOC106578555 coding upstream 1934334 27810049 ~ 27845341 (+)
LOC110535568 LOC106578592 coding downstream 1308973 31088864 ~ 31169983 (+)
LOC110535570 LOC106578590 coding downstream 1973978 31753869 ~ 31790306 (+)
LOC110535575 LOC105028291 coding downstream 2570791 32350682 ~ 32354712 (+)
LOC110535577 LOC106578587 coding downstream 2591570 32371461 ~ 32390805 (+)
LOC110535578 LOC106578586 coding downstream 2682534 32462425 ~ 32476477 (+)
G964491 NA non-coding upstream 12165 29767231 ~ 29767510 (+)
G964072 NA non-coding upstream 290126 29489332 ~ 29489549 (+)
G964061 NA non-coding upstream 295727 29483744 ~ 29483948 (+)
G964048 NA non-coding upstream 303852 29475590 ~ 29475823 (+)
G963633 NA non-coding upstream 305481 29421081 ~ 29474194 (+)
G964546 NA non-coding downstream 21162 29801053 ~ 29801253 (+)
G964580 NA non-coding downstream 44720 29824611 ~ 29825010 (+)
G964591 NA non-coding downstream 49915 29829806 ~ 29882054 (+)
G964994 NA non-coding downstream 335186 30115077 ~ 30119051 (+)
G964995 NA non-coding downstream 336464 30116355 ~ 30120507 (+)
G962100 NA other upstream 1550274 28227528 ~ 28229401 (+)
G961984 NA other upstream 1838100 27897166 ~ 27941575 (+)
G961864 NA other upstream 1950498 27828746 ~ 27829177 (+)
mtpap LOC106578552 other upstream 2014261 27739381 ~ 27765414 (+)
G965838 NA other downstream 1038947 30818838 ~ 30821252 (+)
LOC110536614 LOC106578612 other downstream 3604152 33383589 ~ 33386375 (+)
LOC110535592 lmbr1 other downstream 3678470 33411705 ~ 33473890 (+)
G969455 LOC106578609 other downstream 3823156 33603047 ~ 33603674 (+)
G969456 LOC106578609 other downstream 3824622 33604513 ~ 33604810 (+)

Expression


Co-expression Network