G964546


Basic Information

Item Value
gene id G964546
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 29801053 ~ 29801253 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1099300
aaataatgaaccatgttcaatttggtttaaataatgcaaaaacaaagtggtggagaagaaagtaaaagtgcaatatgtgctatgtaagaaagctaacgtttcagttccttgcttagaacatgagaacatatgaaagctggtggttccttttaacatgagtcttcaatattcccaggtaagaagttttaagttGTATTTAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1099300 True 201 lncRNA 0.32 1 29801053 29801253

Neighbor

gene id symbol gene type direction distance location
LOC118937385 NA coding upstream 1295037 28499110 ~ 28506016 (+)
LOC110536610 NA coding upstream 1308229 28491651 ~ 28492829 (+)
LOC110535556 LOC106578558 coding upstream 1551567 28132122 ~ 28249912 (+)
svila LOC106578556 coding upstream 1790022 27867026 ~ 28011031 (+)
jcada LOC106578555 coding upstream 1955712 27810049 ~ 27845341 (+)
LOC110535568 LOC106578592 coding downstream 1287611 31088864 ~ 31169983 (+)
LOC110535570 LOC106578590 coding downstream 1952616 31753869 ~ 31790306 (+)
LOC110535575 LOC105028291 coding downstream 2549429 32350682 ~ 32354712 (+)
LOC110535577 LOC106578587 coding downstream 2570208 32371461 ~ 32390805 (+)
LOC110535578 LOC106578586 coding downstream 2661172 32462425 ~ 32476477 (+)
G964510 NA non-coding upstream 21162 29779675 ~ 29779891 (+)
G964491 NA non-coding upstream 33543 29767231 ~ 29767510 (+)
G964072 NA non-coding upstream 311504 29489332 ~ 29489549 (+)
G964061 NA non-coding upstream 317105 29483744 ~ 29483948 (+)
G964048 NA non-coding upstream 325230 29475590 ~ 29475823 (+)
G964580 NA non-coding downstream 23358 29824611 ~ 29825010 (+)
G964591 NA non-coding downstream 28553 29829806 ~ 29882054 (+)
G964994 NA non-coding downstream 313824 30115077 ~ 30119051 (+)
G964995 NA non-coding downstream 315102 30116355 ~ 30120507 (+)
G964999 NA non-coding downstream 319546 30120799 ~ 30121207 (+)
G962100 NA other upstream 1571652 28227528 ~ 28229401 (+)
G961984 NA other upstream 1859478 27897166 ~ 27941575 (+)
G961864 NA other upstream 1971876 27828746 ~ 27829177 (+)
mtpap LOC106578552 other upstream 2035639 27739381 ~ 27765414 (+)
G965838 NA other downstream 1017585 30818838 ~ 30821252 (+)
LOC110536614 LOC106578612 other downstream 3582790 33383589 ~ 33386375 (+)
LOC110535592 lmbr1 other downstream 3657108 33411705 ~ 33473890 (+)
G969455 LOC106578609 other downstream 3801794 33603047 ~ 33603674 (+)
G969456 LOC106578609 other downstream 3803260 33604513 ~ 33604810 (+)

Expression


Co-expression Network