G965001


Basic Information

Item Value
gene id G965001
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 30123400 ~ 30123647 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1099782
CCTCCCTCTTGTAGACCCTATTTCATTTTACTTGGTTATTCTAAAATTCAGTACAAGTAAAACACTTCTATCAGTTGTTAAAATAATGCACAATTCAAACAGTAAGTAATCAATCCAACTTACAATAACCAAATAATCAGTCTGTCAGTTAATTGGTTAATCAGTCCAATACTTGTCTGACAGTTTCTTTAAGGAGTGGATTTAGATTAGTTTGGCTCAGTCTTCCTTACTTGGTTGGTCTGGTGAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1099782 True 248 lncRNA 0.34 1 30123400 30123647

Neighbor

gene id symbol gene type direction distance location
LOC118937385 NA coding upstream 1617384 28499110 ~ 28506016 (+)
LOC110536610 NA coding upstream 1630576 28491651 ~ 28492829 (+)
LOC110535556 LOC106578558 coding upstream 1873914 28132122 ~ 28249912 (+)
svila LOC106578556 coding upstream 2112369 27867026 ~ 28011031 (+)
jcada LOC106578555 coding upstream 2278059 27810049 ~ 27845341 (+)
LOC110535568 LOC106578592 coding downstream 965217 31088864 ~ 31169983 (+)
LOC110535570 LOC106578590 coding downstream 1630222 31753869 ~ 31790306 (+)
LOC110535575 LOC105028291 coding downstream 2227035 32350682 ~ 32354712 (+)
LOC110535577 LOC106578587 coding downstream 2247814 32371461 ~ 32390805 (+)
LOC110535578 LOC106578586 coding downstream 2338778 32462425 ~ 32476477 (+)
G965000 NA non-coding upstream 277 30122899 ~ 30123123 (+)
G964999 NA non-coding upstream 2193 30120799 ~ 30121207 (+)
G964995 NA non-coding upstream 2893 30116355 ~ 30120507 (+)
G964994 NA non-coding upstream 4349 30115077 ~ 30119051 (+)
G964591 NA non-coding upstream 241346 29829806 ~ 29882054 (+)
G965004 NA non-coding downstream 1084 30124731 ~ 30124933 (+)
G965007 NA non-coding downstream 4210 30127857 ~ 30128085 (+)
G965022 NA non-coding downstream 17703 30141350 ~ 30141587 (+)
G965290 NA non-coding downstream 247404 30371051 ~ 30379020 (+)
G965502 NA non-coding downstream 379559 30503206 ~ 30509346 (+)
G962100 NA other upstream 1893999 28227528 ~ 28229401 (+)
G961984 NA other upstream 2181825 27897166 ~ 27941575 (+)
G961864 NA other upstream 2294223 27828746 ~ 27829177 (+)
mtpap LOC106578552 other upstream 2357986 27739381 ~ 27765414 (+)
G965838 NA other downstream 695191 30818838 ~ 30821252 (+)
LOC110536614 LOC106578612 other downstream 3260396 33383589 ~ 33386375 (+)
LOC110535592 lmbr1 other downstream 3334714 33411705 ~ 33473890 (+)
G969455 LOC106578609 other downstream 3479400 33603047 ~ 33603674 (+)
G969456 LOC106578609 other downstream 3480866 33604513 ~ 33604810 (+)

Expression


Co-expression Network