G965007


Basic Information

Item Value
gene id G965007
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 30127857 ~ 30128085 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1099788
caactaccccatccccatattgttatttgtatttttgctCTTTTACATCCcactatctctacttgcacattatcatctgcacgtctatcactccactgttaatgctaaattgtaattatttcgcctctatggcctatttgcCTTACTTCCCtcatcttctacatttgcacactgtacatatatttttctatcgtgtcattgactgtacgtttgtttatgtgtaactctg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1099788 True 229 lncRNA 0.37 1 30127857 30128085

Neighbor

gene id symbol gene type direction distance location
LOC118937385 NA coding upstream 1621841 28499110 ~ 28506016 (+)
LOC110536610 NA coding upstream 1635033 28491651 ~ 28492829 (+)
LOC110535556 LOC106578558 coding upstream 1878371 28132122 ~ 28249912 (+)
svila LOC106578556 coding upstream 2116826 27867026 ~ 28011031 (+)
jcada LOC106578555 coding upstream 2282516 27810049 ~ 27845341 (+)
LOC110535568 LOC106578592 coding downstream 960779 31088864 ~ 31169983 (+)
LOC110535570 LOC106578590 coding downstream 1625784 31753869 ~ 31790306 (+)
LOC110535575 LOC105028291 coding downstream 2222597 32350682 ~ 32354712 (+)
LOC110535577 LOC106578587 coding downstream 2243376 32371461 ~ 32390805 (+)
LOC110535578 LOC106578586 coding downstream 2334340 32462425 ~ 32476477 (+)
G965004 NA non-coding upstream 2924 30124731 ~ 30124933 (+)
G965001 NA non-coding upstream 4210 30123400 ~ 30123647 (+)
G965000 NA non-coding upstream 4734 30122899 ~ 30123123 (+)
G964999 NA non-coding upstream 6650 30120799 ~ 30121207 (+)
G964995 NA non-coding upstream 7350 30116355 ~ 30120507 (+)
G965022 NA non-coding downstream 13265 30141350 ~ 30141587 (+)
G965290 NA non-coding downstream 242966 30371051 ~ 30379020 (+)
G965502 NA non-coding downstream 375121 30503206 ~ 30509346 (+)
G965539 NA non-coding downstream 402867 30530952 ~ 30531279 (+)
G965573 NA non-coding downstream 426927 30555012 ~ 30563057 (+)
G962100 NA other upstream 1898456 28227528 ~ 28229401 (+)
G961984 NA other upstream 2186282 27897166 ~ 27941575 (+)
G961864 NA other upstream 2298680 27828746 ~ 27829177 (+)
mtpap LOC106578552 other upstream 2362443 27739381 ~ 27765414 (+)
G965838 NA other downstream 690753 30818838 ~ 30821252 (+)
LOC110536614 LOC106578612 other downstream 3255958 33383589 ~ 33386375 (+)
LOC110535592 lmbr1 other downstream 3330276 33411705 ~ 33473890 (+)
G969455 LOC106578609 other downstream 3474962 33603047 ~ 33603674 (+)
G969456 LOC106578609 other downstream 3476428 33604513 ~ 33604810 (+)

Expression


Co-expression Network