G965290


Basic Information

Item Value
gene id G965290
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 30371051 ~ 30379020 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1100077
ggccgaatactttcgcaaggcactgtatactgctcaaaaaaataaagggaacacttaaacaacacaatgtaactccaagtcaatcacacttctgtgacatcaaactgtccacttaggaagcaacactgattgacaataaatttcacatgctgttgtgcaaatgaaatagacaacaggtggaaattataggcaattagcaagacacccccaataaaggagtggttctgcaggtggtgaccacagaccacttctcagt

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1100077 True 256 lncRNA 0.41 2 30371051 30379020

Neighbor

gene id symbol gene type direction distance location
LOC118937385 NA coding upstream 1865035 28499110 ~ 28506016 (+)
LOC110536610 NA coding upstream 1878227 28491651 ~ 28492829 (+)
LOC110535556 LOC106578558 coding upstream 2121565 28132122 ~ 28249912 (+)
svila LOC106578556 coding upstream 2360020 27867026 ~ 28011031 (+)
jcada LOC106578555 coding upstream 2525710 27810049 ~ 27845341 (+)
LOC110535568 LOC106578592 coding downstream 709844 31088864 ~ 31169983 (+)
LOC110535570 LOC106578590 coding downstream 1374849 31753869 ~ 31790306 (+)
LOC110535575 LOC105028291 coding downstream 1971662 32350682 ~ 32354712 (+)
LOC110535577 LOC106578587 coding downstream 1992441 32371461 ~ 32390805 (+)
LOC110535578 LOC106578586 coding downstream 2083405 32462425 ~ 32476477 (+)
G965022 NA non-coding upstream 229464 30141350 ~ 30141587 (+)
G965007 NA non-coding upstream 242966 30127857 ~ 30128085 (+)
G965004 NA non-coding upstream 246118 30124731 ~ 30124933 (+)
G965001 NA non-coding upstream 247404 30123400 ~ 30123647 (+)
G965000 NA non-coding upstream 247928 30122899 ~ 30123123 (+)
G965502 NA non-coding downstream 124186 30503206 ~ 30509346 (+)
G965539 NA non-coding downstream 151932 30530952 ~ 30531279 (+)
G965573 NA non-coding downstream 175992 30555012 ~ 30563057 (+)
G965578 NA non-coding downstream 199617 30578637 ~ 30578843 (+)
G965591 NA non-coding downstream 210684 30589704 ~ 30589998 (+)
G962100 NA other upstream 2141650 28227528 ~ 28229401 (+)
G961984 NA other upstream 2429476 27897166 ~ 27941575 (+)
G961864 NA other upstream 2541874 27828746 ~ 27829177 (+)
mtpap LOC106578552 other upstream 2605637 27739381 ~ 27765414 (+)
G965838 NA other downstream 439818 30818838 ~ 30821252 (+)
LOC110536614 LOC106578612 other downstream 3005023 33383589 ~ 33386375 (+)
LOC110535592 lmbr1 other downstream 3079341 33411705 ~ 33473890 (+)
G969455 LOC106578609 other downstream 3224027 33603047 ~ 33603674 (+)
G969456 LOC106578609 other downstream 3225493 33604513 ~ 33604810 (+)

Expression


Co-expression Network