G965838


Basic Information

Item Value
gene id G965838
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 30818838 ~ 30821252 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1100642
TGGAATGATCAGCCTTGTAGATTCAGTGCCACTTTTTAAATCCCTACTGAAGACATAATTTTATAAAGAGGCTCATGGGCTTCCGGCGCCGACGCCTGGGCttctggcgccgacagagatggccgcctcgcttcgcgttcctaggaaactatgcagttttttgtttttttacgtgttatttcttacattggtaccccaggtcatcttaggtttcattacatacagtcgagaagaactactgaatataagagcagcgtcaactcaccatcagtacgaccaagaatatgactttctcGGAGCGGATcatgtgttctgccttccacccaggacaacggaatggatccctgCCTGCGACCCAAAACCATGACGTCGTAAAAcaggcaaacgaagcggtcttctggtcaggctccggagacgggcacatcgcgcgccactccctagcatactactcgccaatgtccagtctcttgacaacaagtttgatgaaatccgagcaagggtagcattccagagggacatcagggactgtaacgttctttgcttcacggaaatatggctcactcgagagacgctatcggagtcggtgcagccagctggtttctccacccATCGCGcggacagaaacaaacatctttctgacagaagctaaaacaagaagctcccacgctgaggtctgttcaacgctggtccgtccaatctgattccacgctccaagactgcttccatcacgtggacgggatatgttttgtattgtgtcaaacaacaacattgacgaatacgctgattcggtgagcgagttcattagaacgtgcgttgaagatgtcattcccatagcaacgattaaaacattcccaaaccagaaaccgtggattgatggcagcattcgcgtgaaactgaaagcgcgaaccactgcttttaatcagggcaaggtgaccggaaacatgaccgaatacaaacagtgtaacaattccctccgcaaggcaatcaaacaagctaagtgtcagtatagagacaaagtagaatcgcaattcaacggctcagacacaagaggtatatggcagggtctacagtcaatcacggattacaaaaagaaaaccagcccagtcacggaccaggatgccttgctcccgctttgaggacaatacggtgccactgacacggccgcaaccaaaacctgaggactctccttcactttaaccgaggtgagtaaaacatttaaacgtgttaaccctcgcaaggctgcatgCCTAGAATGCATTCCCaaccgcgccctcagagcatgcgcagaccagctggctggtgtgtttacagacatattcaatcaacccttatcccagtctgctgttcccacatgcttcaagagggccaccattgttcctgttcccaagaaagcttaggtaactgagctaaatgactaccgccccgtagcacacacttccgtcatcatgaagtgctttgagagactagtcaaggaccatatcacctccaccctacctgacaccctagacccactccaatttgcttaccgcccaaataggtccacagacgatgcaatctcaaccacactgcacactgccctaacccatctggacaagaggaatacctatgtgagaatgctgttcatcgactacagctcggcatttaacaccatagtgccctccaagctcgtcatcaagctcgagaccctgggtctcgccCCCGAACTGTGCAACTGgttactggacttcctgacgggcctcccccaggtggtgagggtaggtaacaacatctccaccccgctgatcctcaacactggggccctacaagggtgcgttctgagccctctcctgtactccctgttcacccacgactgcgtggccacgcacgcctccaactcaatcatcaagtttgcggacgacaaaaaagtggtaggcttgattaccaacgacgagacggcctacagggaggaggtgagg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1100642 True 1955 TUCP 0.50 2 30818838 30821252

Neighbor

gene id symbol gene type direction distance location
LOC118937385 NA coding upstream 2312822 28499110 ~ 28506016 (+)
LOC110536610 NA coding upstream 2326014 28491651 ~ 28492829 (+)
LOC110535556 LOC106578558 coding upstream 2569352 28132122 ~ 28249912 (+)
svila LOC106578556 coding upstream 2807807 27867026 ~ 28011031 (+)
jcada LOC106578555 coding upstream 2973497 27810049 ~ 27845341 (+)
LOC110535568 LOC106578592 coding downstream 267612 31088864 ~ 31169983 (+)
LOC110535570 LOC106578590 coding downstream 932617 31753869 ~ 31790306 (+)
LOC110535575 LOC105028291 coding downstream 1529430 32350682 ~ 32354712 (+)
LOC110535577 LOC106578587 coding downstream 1550209 32371461 ~ 32390805 (+)
LOC110535578 LOC106578586 coding downstream 1641173 32462425 ~ 32476477 (+)
G965740 NA non-coding upstream 128438 30690135 ~ 30690400 (+)
G965730 NA non-coding upstream 133736 30684777 ~ 30685102 (+)
G965726 NA non-coding upstream 138776 30679766 ~ 30680062 (+)
G965709 NA non-coding upstream 152125 30665776 ~ 30666713 (+)
G965695 NA non-coding upstream 161781 30656844 ~ 30657057 (+)
G966224 NA non-coding downstream 250021 31071273 ~ 31071514 (+)
G966244 NA non-coding downstream 261353 31082605 ~ 31082821 (+)
G966257 NA non-coding downstream 310180 31131432 ~ 31132261 (+)
G966308 NA non-coding downstream 350115 31171367 ~ 31172251 (+)
G966323 NA non-coding downstream 378007 31199259 ~ 31199820 (+)
G962100 NA other upstream 2589437 28227528 ~ 28229401 (+)
G961984 NA other upstream 2877263 27897166 ~ 27941575 (+)
G961864 NA other upstream 2989661 27828746 ~ 27829177 (+)
mtpap LOC106578552 other upstream 3053424 27739381 ~ 27765414 (+)
LOC110536614 LOC106578612 other downstream 2562791 33383589 ~ 33386375 (+)
LOC110535592 lmbr1 other downstream 2637109 33411705 ~ 33473890 (+)
G969455 LOC106578609 other downstream 2781795 33603047 ~ 33603674 (+)
G969456 LOC106578609 other downstream 2783261 33604513 ~ 33604810 (+)
G969752 LOC106578632 other downstream 2973123 33794375 ~ 33795061 (+)

Expression


Co-expression Network