G966323


Basic Information

Item Value
gene id G966323
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 31199259 ~ 31199820 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1101147
GTCAAATATTGCGCAAGTCATTTTACAATCTTTTGAAAGCTGAAAATCACACGCAGACATGTCAGATCAGGAATAGGCCTACCTCTCGTTTGTTACATAGGGATCTAAATAGTCTGCttaccaaatggaaccctatgccCTAAGATGCAAGTCACAGCACTACACAGCTCAAGAACCGGGATCATACTAGACACAAGTCTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1101147 True 202 lncRNA 0.42 2 31199259 31199820

Neighbor

gene id symbol gene type direction distance location
LOC110535568 LOC106578592 coding upstream 29276 31088864 ~ 31169983 (+)
LOC118937385 NA coding upstream 2693243 28499110 ~ 28506016 (+)
LOC110536610 NA coding upstream 2706435 28491651 ~ 28492829 (+)
LOC110535556 LOC106578558 coding upstream 2949773 28132122 ~ 28249912 (+)
svila LOC106578556 coding upstream 3188228 27867026 ~ 28011031 (+)
LOC110535570 LOC106578590 coding downstream 554049 31753869 ~ 31790306 (+)
LOC110535575 LOC105028291 coding downstream 1150862 32350682 ~ 32354712 (+)
LOC110535577 LOC106578587 coding downstream 1171641 32371461 ~ 32390805 (+)
LOC110535578 LOC106578586 coding downstream 1262605 32462425 ~ 32476477 (+)
ppp1r3g LOC106578584 coding downstream 1283324 32483144 ~ 32485710 (+)
G966308 NA non-coding upstream 27008 31171367 ~ 31172251 (+)
G966257 NA non-coding upstream 66998 31131432 ~ 31132261 (+)
G966244 NA non-coding upstream 116438 31082605 ~ 31082821 (+)
G966224 NA non-coding upstream 127745 31071273 ~ 31071514 (+)
G965740 NA non-coding upstream 508859 30690135 ~ 30690400 (+)
G966325 drosha non-coding downstream 1854 31201674 ~ 31214886 (+)
G966364 NA non-coding downstream 43406 31243226 ~ 31248411 (+)
G966409 drosha non-coding downstream 96452 31296272 ~ 31301742 (+)
G966424 NA non-coding downstream 128389 31328209 ~ 31328633 (+)
G966425 NA non-coding downstream 133868 31333688 ~ 31333900 (+)
G965838 NA other upstream 378007 30818838 ~ 30821252 (+)
G962100 NA other upstream 2969858 28227528 ~ 28229401 (+)
G961984 NA other upstream 3257684 27897166 ~ 27941575 (+)
G961864 NA other upstream 3370082 27828746 ~ 27829177 (+)
LOC110536614 LOC106578612 other downstream 2184223 33383589 ~ 33386375 (+)
LOC110535592 lmbr1 other downstream 2258541 33411705 ~ 33473890 (+)
G969455 LOC106578609 other downstream 2403227 33603047 ~ 33603674 (+)
G969456 LOC106578609 other downstream 2404693 33604513 ~ 33604810 (+)
G969752 LOC106578632 other downstream 2594555 33794375 ~ 33795061 (+)

Expression


Co-expression Network