G966425


Basic Information

Item Value
gene id G966425
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 31333688 ~ 31333900 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1101262
caataaatgaataacgaccgtgaagctataataagaaaactgtgctgacacaagcaactaacatagacatagataatcacccacaaagtacccacagaatatggctgcctaaatatggttcccaatcagagaaaacaatagacagctgcctctaattgagaaccaatctaggcaaccatagacatacaaactacCTAGAAACAGACCATTAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1101262 True 213 lncRNA 0.38 1 31333688 31333900

Neighbor

gene id symbol gene type direction distance location
LOC110535568 LOC106578592 coding upstream 163705 31088864 ~ 31169983 (+)
LOC118937385 NA coding upstream 2827672 28499110 ~ 28506016 (+)
LOC110536610 NA coding upstream 2840864 28491651 ~ 28492829 (+)
LOC110535556 LOC106578558 coding upstream 3084202 28132122 ~ 28249912 (+)
svila LOC106578556 coding upstream 3322657 27867026 ~ 28011031 (+)
LOC110535570 LOC106578590 coding downstream 419969 31753869 ~ 31790306 (+)
LOC110535575 LOC105028291 coding downstream 1016782 32350682 ~ 32354712 (+)
LOC110535577 LOC106578587 coding downstream 1037561 32371461 ~ 32390805 (+)
LOC110535578 LOC106578586 coding downstream 1128525 32462425 ~ 32476477 (+)
ppp1r3g LOC106578584 coding downstream 1149244 32483144 ~ 32485710 (+)
G966424 NA non-coding upstream 5055 31328209 ~ 31328633 (+)
G966409 drosha non-coding upstream 31946 31296272 ~ 31301742 (+)
G966364 NA non-coding upstream 85277 31243226 ~ 31248411 (+)
G966325 drosha non-coding upstream 118802 31201674 ~ 31214886 (+)
G966323 NA non-coding upstream 133868 31199259 ~ 31199820 (+)
G966584 NA non-coding downstream 3444 31337344 ~ 31337563 (+)
G966623 NA non-coding downstream 51143 31385043 ~ 31385286 (+)
G966681 NA non-coding downstream 71895 31405795 ~ 31406170 (+)
G966682 NA non-coding downstream 73584 31407484 ~ 31407880 (+)
G966693 NA non-coding downstream 86794 31420694 ~ 31420998 (+)
G965838 NA other upstream 512436 30818838 ~ 30821252 (+)
G962100 NA other upstream 3104287 28227528 ~ 28229401 (+)
G961984 NA other upstream 3392113 27897166 ~ 27941575 (+)
G961864 NA other upstream 3504511 27828746 ~ 27829177 (+)
LOC110536614 LOC106578612 other downstream 2050143 33383589 ~ 33386375 (+)
LOC110535592 lmbr1 other downstream 2124461 33411705 ~ 33473890 (+)
G969455 LOC106578609 other downstream 2269147 33603047 ~ 33603674 (+)
G969456 LOC106578609 other downstream 2270613 33604513 ~ 33604810 (+)
G969752 LOC106578632 other downstream 2460475 33794375 ~ 33795061 (+)

Expression


Co-expression Network