Gene
RNA
| Item | Value |
|---|---|
| gene id | G966914 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 31573910 ~ 31577000 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1101767 | False | 348 | lncRNA | 0.42 | 2 | 31573910 | 31577000 |
| TU1101768 | True | 348 | lncRNA | 0.42 | 2 | 31573910 | 31577000 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110535568 | LOC106578592 | coding | upstream | 403927 | 31088864 ~ 31169983 (+) |
| LOC118937385 | NA | coding | upstream | 3067894 | 28499110 ~ 28506016 (+) |
| LOC110536610 | NA | coding | upstream | 3081086 | 28491651 ~ 28492829 (+) |
| LOC110535556 | LOC106578558 | coding | upstream | 3324424 | 28132122 ~ 28249912 (+) |
| svila | LOC106578556 | coding | upstream | 3562879 | 27867026 ~ 28011031 (+) |
| LOC110535570 | LOC106578590 | coding | downstream | 176869 | 31753869 ~ 31790306 (+) |
| LOC110535575 | LOC105028291 | coding | downstream | 773682 | 32350682 ~ 32354712 (+) |
| LOC110535577 | LOC106578587 | coding | downstream | 794461 | 32371461 ~ 32390805 (+) |
| LOC110535578 | LOC106578586 | coding | downstream | 885425 | 32462425 ~ 32476477 (+) |
| ppp1r3g | LOC106578584 | coding | downstream | 906144 | 32483144 ~ 32485710 (+) |
| G966712 | NA | non-coding | upstream | 126624 | 31446997 ~ 31447286 (+) |
| G966701 | NA | non-coding | upstream | 139703 | 31433928 ~ 31434207 (+) |
| G966693 | NA | non-coding | upstream | 152912 | 31420694 ~ 31420998 (+) |
| G966682 | NA | non-coding | upstream | 166030 | 31407484 ~ 31407880 (+) |
| G966681 | NA | non-coding | upstream | 167740 | 31405795 ~ 31406170 (+) |
| G966999 | LOC106601697 | non-coding | downstream | 63299 | 31640299 ~ 31640585 (+) |
| G967015 | NA | non-coding | downstream | 86204 | 31663204 ~ 31663494 (+) |
| G967029 | NA | non-coding | downstream | 114523 | 31691523 ~ 31691909 (+) |
| G967034 | NA | non-coding | downstream | 120665 | 31697665 ~ 31697887 (+) |
| G967043 | NA | non-coding | downstream | 134978 | 31711978 ~ 31712213 (+) |
| G965838 | NA | other | upstream | 752658 | 30818838 ~ 30821252 (+) |
| G962100 | NA | other | upstream | 3344509 | 28227528 ~ 28229401 (+) |
| G961984 | NA | other | upstream | 3632335 | 27897166 ~ 27941575 (+) |
| G961864 | NA | other | upstream | 3744733 | 27828746 ~ 27829177 (+) |
| LOC110536614 | LOC106578612 | other | downstream | 1807043 | 33383589 ~ 33386375 (+) |
| LOC110535592 | lmbr1 | other | downstream | 1881361 | 33411705 ~ 33473890 (+) |
| G969455 | LOC106578609 | other | downstream | 2026047 | 33603047 ~ 33603674 (+) |
| G969456 | LOC106578609 | other | downstream | 2027513 | 33604513 ~ 33604810 (+) |
| G969752 | LOC106578632 | other | downstream | 2217375 | 33794375 ~ 33795061 (+) |
