G966999 (LOC106601697)


Basic Information

Item Value
gene id G966999
gene name LOC106601697
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 31640299 ~ 31640585 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1101857
CTGGAGCACATGACCACCTCTCTGGAATCCACCCACTTCACAAAGAGCAGGCCATCTTGTCGAATCCATCTCATGTATTGTTTTAGGCTAATTCTGTCCCttgaggctaccatcctctcatcgaTGGAAAGGTTGTGGGCGGGCTGAAAATAGGTCTTGCAGGCCTCAACCACAATGTGGTAGAGAGGTTTTATTTTGCAGAGCTTATCAAACCTTGCAGTGCCTCGCTTCTTCTCATTGTCCTCATCAACTTCTGGGTCACGTGATATTGTCAGAAACCTTTTGCA

Function

NR:

description
PREDICTED: piggyBac transposable element-derived protein 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1101857 True 287 lncRNA 0.47 1 31640299 31640585

Neighbor

gene id symbol gene type direction distance location
LOC110535568 LOC106578592 coding upstream 470316 31088864 ~ 31169983 (+)
LOC118937385 NA coding upstream 3134283 28499110 ~ 28506016 (+)
LOC110536610 NA coding upstream 3147475 28491651 ~ 28492829 (+)
LOC110535556 LOC106578558 coding upstream 3390813 28132122 ~ 28249912 (+)
svila LOC106578556 coding upstream 3629268 27867026 ~ 28011031 (+)
LOC110535570 LOC106578590 coding downstream 113284 31753869 ~ 31790306 (+)
LOC110535575 LOC105028291 coding downstream 710097 32350682 ~ 32354712 (+)
LOC110535577 LOC106578587 coding downstream 730876 32371461 ~ 32390805 (+)
LOC110535578 LOC106578586 coding downstream 821840 32462425 ~ 32476477 (+)
ppp1r3g LOC106578584 coding downstream 842559 32483144 ~ 32485710 (+)
G966914 NA non-coding upstream 63299 31573910 ~ 31577000 (+)
G966712 NA non-coding upstream 193013 31446997 ~ 31447286 (+)
G966701 NA non-coding upstream 206092 31433928 ~ 31434207 (+)
G966693 NA non-coding upstream 219301 31420694 ~ 31420998 (+)
G966682 NA non-coding upstream 232419 31407484 ~ 31407880 (+)
G967015 NA non-coding downstream 22619 31663204 ~ 31663494 (+)
G967029 NA non-coding downstream 50938 31691523 ~ 31691909 (+)
G967034 NA non-coding downstream 57080 31697665 ~ 31697887 (+)
G967043 NA non-coding downstream 71393 31711978 ~ 31712213 (+)
G967046 NA non-coding downstream 75378 31715963 ~ 31716177 (+)
G965838 NA other upstream 819047 30818838 ~ 30821252 (+)
G962100 NA other upstream 3410898 28227528 ~ 28229401 (+)
G961984 NA other upstream 3698724 27897166 ~ 27941575 (+)
G961864 NA other upstream 3811122 27828746 ~ 27829177 (+)
LOC110536614 LOC106578612 other downstream 1743458 33383589 ~ 33386375 (+)
LOC110535592 lmbr1 other downstream 1817776 33411705 ~ 33473890 (+)
G969455 LOC106578609 other downstream 1962462 33603047 ~ 33603674 (+)
G969456 LOC106578609 other downstream 1963928 33604513 ~ 33604810 (+)
G969752 LOC106578632 other downstream 2153790 33794375 ~ 33795061 (+)

Expression


Co-expression Network