G967975


Basic Information

Item Value
gene id G967975
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 32417655 ~ 32418080 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1102853
aaatgaggctcagtagtgtgtgtggcctccacgtgcctgtatgacctccctacaacgcctgggcatgctcctgatgaggtggcggatggtctcctgagggatctcctcccagacctggactaaagcatccgccaactcctggacagcctgtggtgcaacgacacactccagccacatgaggtctagtattgtcttgcattaggaggaacccagggccaaccgcaccagcatatggtctcacaaggggtctgaggatctcatctcggtacctaatggcagtcaggctacctctggcgagcacatggagggc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1102853 True 310 lncRNA 0.57 2 32417655 32418080

Neighbor

gene id symbol gene type direction distance location
LOC110535577 LOC106578587 coding upstream 26850 32371461 ~ 32390805 (+)
LOC110535575 LOC105028291 coding upstream 62943 32350682 ~ 32354712 (+)
LOC110535570 LOC106578590 coding upstream 628305 31753869 ~ 31790306 (+)
LOC110535568 LOC106578592 coding upstream 1247672 31088864 ~ 31169983 (+)
LOC118937385 NA coding upstream 3911639 28499110 ~ 28506016 (+)
LOC110535578 LOC106578586 coding downstream 44345 32462425 ~ 32476477 (+)
ppp1r3g LOC106578584 coding downstream 65064 32483144 ~ 32485710 (+)
fars2 fars2 coding downstream 131409 32549489 ~ 32665562 (+)
LOC110535587 LOC106578620 coding downstream 420020 32838100 ~ 32859519 (+)
LOC110536598 LOC106578619 coding downstream 467707 32869194 ~ 32928578 (+)
G967947 NA non-coding upstream 21278 32395356 ~ 32396377 (+)
G967948 NA non-coding upstream 23907 32392886 ~ 32393748 (+)
G967786 NA non-coding upstream 110069 32303841 ~ 32307586 (+)
G967583 NA non-coding upstream 316965 32096547 ~ 32100690 (+)
G967550 NA non-coding upstream 353777 32063536 ~ 32063878 (+)
G967976 NA non-coding downstream 669 32418749 ~ 32418965 (+)
G967980 NA non-coding downstream 9365 32427445 ~ 32427759 (+)
G967981 NA non-coding downstream 10816 32428896 ~ 32429275 (+)
G967982 NA non-coding downstream 11213 32429293 ~ 32429502 (+)
G967959 NA non-coding downstream 59542 32477622 ~ 32480568 (+)
G965838 NA other upstream 1596403 30818838 ~ 30821252 (+)
LOC110535556 LOC106578558 other upstream 4167743 28132122 ~ 28249912 (+)
G962100 NA other upstream 4188254 28227528 ~ 28229401 (+)
G961984 NA other upstream 4476080 27897166 ~ 27941575 (+)
G961864 NA other upstream 4588478 27828746 ~ 27829177 (+)
LOC110536614 LOC106578612 other downstream 965963 33383589 ~ 33386375 (+)
LOC110535592 lmbr1 other downstream 1040281 33411705 ~ 33473890 (+)
G969455 LOC106578609 other downstream 1184967 33603047 ~ 33603674 (+)
G969456 LOC106578609 other downstream 1186433 33604513 ~ 33604810 (+)
G969752 LOC106578632 other downstream 1376295 33794375 ~ 33795061 (+)

Expression


Co-expression Network