G967980


Basic Information

Item Value
gene id G967980
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 32427445 ~ 32427759 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1102858
aggcacagtcaatttagtgtatgtaaacatctgaccactggaattgtgacacagtgaattttaagtgaattaatctgcctgtaaacaattgttggaagaatgacTTGTGttatgaacaaagtagatgtcctaaccgatttgccaaaactatagtatgttaacaagaaatttgtggagtggttgaaaaacaagttttaatgactccaacctaaatgcaAACTTCCTTATTTATTATAAtgattgttattttttatttttatttgtatgtaactgttatgaaagttgtattgtcaattttgttttgtatttaaaccc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1102858 True 315 lncRNA 0.30 1 32427445 32427759

Neighbor

gene id symbol gene type direction distance location
LOC110535577 LOC106578587 coding upstream 36640 32371461 ~ 32390805 (+)
LOC110535575 LOC105028291 coding upstream 72733 32350682 ~ 32354712 (+)
LOC110535570 LOC106578590 coding upstream 638095 31753869 ~ 31790306 (+)
LOC110535568 LOC106578592 coding upstream 1257462 31088864 ~ 31169983 (+)
LOC118937385 NA coding upstream 3921429 28499110 ~ 28506016 (+)
LOC110535578 LOC106578586 coding downstream 34666 32462425 ~ 32476477 (+)
ppp1r3g LOC106578584 coding downstream 55385 32483144 ~ 32485710 (+)
fars2 fars2 coding downstream 121730 32549489 ~ 32665562 (+)
LOC110535587 LOC106578620 coding downstream 410341 32838100 ~ 32859519 (+)
LOC110536598 LOC106578619 coding downstream 458028 32869194 ~ 32928578 (+)
G967976 NA non-coding upstream 8480 32418749 ~ 32418965 (+)
G967975 NA non-coding upstream 9365 32417655 ~ 32418080 (+)
G967947 NA non-coding upstream 31068 32395356 ~ 32396377 (+)
G967948 NA non-coding upstream 33697 32392886 ~ 32393748 (+)
G967786 NA non-coding upstream 119859 32303841 ~ 32307586 (+)
G967981 NA non-coding downstream 1137 32428896 ~ 32429275 (+)
G967982 NA non-coding downstream 1534 32429293 ~ 32429502 (+)
G967959 NA non-coding downstream 49863 32477622 ~ 32480568 (+)
G968129 NA non-coding downstream 239050 32666809 ~ 32667565 (+)
G968130 NA non-coding downstream 239907 32667666 ~ 32667918 (+)
G965838 NA other upstream 1606193 30818838 ~ 30821252 (+)
LOC110535556 LOC106578558 other upstream 4177533 28132122 ~ 28249912 (+)
G962100 NA other upstream 4198044 28227528 ~ 28229401 (+)
G961984 NA other upstream 4485870 27897166 ~ 27941575 (+)
G961864 NA other upstream 4598268 27828746 ~ 27829177 (+)
LOC110536614 LOC106578612 other downstream 956284 33383589 ~ 33386375 (+)
LOC110535592 lmbr1 other downstream 1030602 33411705 ~ 33473890 (+)
G969455 LOC106578609 other downstream 1175288 33603047 ~ 33603674 (+)
G969456 LOC106578609 other downstream 1176754 33604513 ~ 33604810 (+)
G969752 LOC106578632 other downstream 1366616 33794375 ~ 33795061 (+)

Expression


Co-expression Network