G968720



Basic Information


Item Value
gene id G968720
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 32428600 ~ 32429000 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1103649
GCTCTTGAGACATTTATAAGTTCTATTCAAGAATCAATTTCTTCAATTAATTTATAAGCCCAAAAATTGATTGCTCCTTTAAAGTGAGTTCCATCCAGACAGCGGAGTTGGTCTGTTTCTTAACTAGTCAACTGAGGTACCCTCTGAGCTGTATCCGGACTGAGCCGGTGTAGCACTGTCCCAGAGTCAACCGCCAGGGGGTGCTCAGATCCTTCCTGTCCCACCTGAGGGATAGCCTTCAGGCAGTCTGGATTTCCAGCCCGCGTGACCAGCAAGTCCTGCTACCACATCGCCACACACGTACAGAACTCTCGACTGTCATTGATACGACCATGTGCCATTTTCACATGTAAACACACATACTGGTACTATGTTTTGCCTCTCATATGTTTATCTTGCAT

Function


NR:

description
uncharacterized protein C18orf63-like

GO: NA

KEGG:

id description

RNA


RNA id representative length rna type GC content exon number start site end site
TU1103649 True 401 lncRNA 0.46 1 32428600 32429000

Neighbor


gene id symbol gene type direction distance location
LOC110535574 peci coding downstream 113725 32298402 ~ 32314875 (-)
LOC110535572 LOC106578588 coding downstream 170193 32245466 ~ 32258407 (-)
LOC110535571 LOC106578589 coding downstream 520336 31853797 ~ 31908264 (-)
LOC110535569 LOC106578596 coding downstream 1019215 31407966 ~ 31409385 (-)
drosha drosha coding downstream 1099976 31171381 ~ 31328624 (-)
LOC110536613 NA coding upstream 5028 32434028 ~ 32435451 (-)
LOC110535581 LOC106578582 coding upstream 60195 32489195 ~ 32549643 (-)
LOC110535582 LOC106578581 coding upstream 266362 32695362 ~ 32702585 (-)
LOC110536595 LOC106578630 coding upstream 293273 32722273 ~ 32749027 (-)
LOC110536597 LOC106578630 coding upstream 338765 32767765 ~ 32796075 (-)
G968717 NA non-coding downstream 1023 32427191 ~ 32427577 (-)
G968711 NA non-coding downstream 11691 32416684 ~ 32416909 (-)
G968709 NA non-coding downstream 22901 32405380 ~ 32405699 (-)
G968656 LOC100136012 non-coding downstream 85680 32318300 ~ 32342920 (-)
G967632 NA non-coding downstream 298853 32080024 ~ 32129747 (-)
G968722 NA non-coding upstream 1832 32430832 ~ 32431071 (-)
G968748 NA non-coding upstream 48612 32477612 ~ 32480544 (-)
G968749 NA non-coding upstream 54301 32483301 ~ 32486674 (-)
G968751 NA non-coding upstream 57998 32486998 ~ 32488332 (-)
G968844 NA non-coding upstream 207493 32636493 ~ 32666377 (-)
G967535 NA other downstream 375407 32050960 ~ 32053193 (-)
G966663 LOC100194703 other downstream 1037256 31391036 ~ 31391344 (-)
G962982 NA other downstream 3706297 28721646 ~ 28722303 (-)
G961930 LOC106578555 other downstream 4591832 27835966 ~ 27836768 (-)
G961041 LOC107713907 other downstream 5625774 26737174 ~ 26802826 (-)
G968868 NA other upstream 237752 32666752 ~ 32667490 (-)
G970066 NA other upstream 1445814 33874814 ~ 33875272 (-)
LOC110535616 LOC106578707 other upstream 2381293 34810223 ~ 34978953 (-)
G971137 NA other upstream 2407972 34836972 ~ 34838926 (-)

Expression



Co-expression Network